Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRPS28Q9Y2Q9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRPS28Q9Y2Q9 PCDHAC2-203ENST00000615316 3011 ntBASIC17.73■□□□□ 0.43
MRPS28Q9Y2Q9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
MRPS28Q9Y2Q9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MRPS28Q9Y2Q9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.73■□□□□ 0.43
MRPS28Q9Y2Q9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRPS28Q9Y2Q9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.73■□□□□ 0.43
MRPS28Q9Y2Q9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRPS28Q9Y2Q9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MRPS28Q9Y2Q9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
MRPS28Q9Y2Q9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 AP004607.4-201ENST00000530158 1459 ntBASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MRPS28Q9Y2Q9 AC011484.1-201ENST00000377652 1995 ntBASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 EEF1DP3-203ENST00000566025 782 ntBASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 AC053503.5-201ENST00000601508 636 ntBASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MRPS28Q9Y2Q9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.71■□□□□ 0.42
MRPS28Q9Y2Q9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.71■□□□□ 0.42
MRPS28Q9Y2Q9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
MRPS28Q9Y2Q9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 MIR572-201ENST00000384983 95 ntBASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 PBX2P1-201ENST00000493219 1291 ntBASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 AC061975.6-201ENST00000579045 1553 ntBASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MRPS28Q9Y2Q9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.69■□□□□ 0.42
MRPS28Q9Y2Q9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms