Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 MIR4787-201ENST00000607364 84 ntBASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 AC018445.3-201ENST00000624177 1945 ntBASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 MIR3181-201ENST00000578512 73 ntBASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.81■□□□□ 0.28
RCL1Q9Y2P8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 TSPY9P-201ENST00000440215 945 ntBASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 TSPY11P-201ENST00000442607 1045 ntBASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 AC099791.2-201ENST00000605725 427 ntBASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 AC116562.4-201ENST00000641316 2276 ntBASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCL1Q9Y2P8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RCL1Q9Y2P8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms