Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 TPRG1LP1-201ENST00000598702 760 ntBASIC20.96■□□□□ 0.95
CHMP2BQ9UQN3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2BQ9UQN3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2BQ9UQN3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2BQ9UQN3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2BQ9UQN3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.96■□□□□ 0.95
CHMP2BQ9UQN3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHMP2BQ9UQN3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 AC011484.1-201ENST00000377652 1995 ntBASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP2BQ9UQN3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 AL512408.1-201ENST00000569378 2000 ntBASIC20.94■□□□□ 0.94
CHMP2BQ9UQN3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 AFG3L1P-217ENST00000557444 2447 ntBASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CHMP2BQ9UQN3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 AC112907.3-201ENST00000577781 2400 ntBASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 AL354811.1-201ENST00000610286 706 ntBASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 MIR6084-201ENST00000622012 110 ntBASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2BQ9UQN3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP2BQ9UQN3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMP2BQ9UQN3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.91■□□□□ 0.94
CHMP2BQ9UQN3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP2BQ9UQN3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMP2BQ9UQN3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMP2BQ9UQN3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CHMP2BQ9UQN3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms