Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 AC091874.3-201ENST00000512672 1195 ntBASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 KRT18P6-201ENST00000555540 1265 ntBASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 AL589743.5-201ENST00000616611 1050 ntBASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
UBQLN1Q9UMX0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 KRT18P68-201ENST00000392293 1000 ntBASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 MYC-209ENST00000641252 345 ntBASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 AC011484.1-201ENST00000377652 1995 ntBASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
UBQLN1Q9UMX0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 DUSP5P2-201ENST00000426873 1033 ntBASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 AC097658.1-201ENST00000475555 843 ntBASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
UBQLN1Q9UMX0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 FEM1AP4-201ENST00000443167 1987 ntBASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
UBQLN1Q9UMX0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
UBQLN1Q9UMX0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms