Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.82■□□□□ 0.92
HACD3Q9P035 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HACD3Q9P035 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
HACD3Q9P035 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HACD3Q9P035 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.82■□□□□ 0.92
HACD3Q9P035 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.82■□□□□ 0.92
HACD3Q9P035 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HACD3Q9P035 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HACD3Q9P035 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HACD3Q9P035 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.81■□□□□ 0.92
HACD3Q9P035 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HACD3Q9P035 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HACD3Q9P035 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HACD3Q9P035 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.81■□□□□ 0.92
HACD3Q9P035 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.81■□□□□ 0.92
HACD3Q9P035 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.81■□□□□ 0.92
HACD3Q9P035 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HACD3Q9P035 AC010536.3-201ENST00000620306 533 ntBASIC20.81■□□□□ 0.92
HACD3Q9P035 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.81■□□□□ 0.92
HACD3Q9P035 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HACD3Q9P035 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.81■□□□□ 0.92
HACD3Q9P035 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HACD3Q9P035 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HACD3Q9P035 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HACD3Q9P035 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.8■□□□□ 0.92
HACD3Q9P035 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.8■□□□□ 0.92
HACD3Q9P035 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HACD3Q9P035 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.8■□□□□ 0.92
HACD3Q9P035 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.8■□□□□ 0.92
HACD3Q9P035 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.8■□□□□ 0.92
HACD3Q9P035 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HACD3Q9P035 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HACD3Q9P035 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HACD3Q9P035 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HACD3Q9P035 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HACD3Q9P035 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HACD3Q9P035 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HACD3Q9P035 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HACD3Q9P035 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HACD3Q9P035 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.79■□□□□ 0.92
HACD3Q9P035 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HACD3Q9P035 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HACD3Q9P035 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HACD3Q9P035 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.79■□□□□ 0.92
HACD3Q9P035 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HACD3Q9P035 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.79■□□□□ 0.92
HACD3Q9P035 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HACD3Q9P035 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.79■□□□□ 0.92
HACD3Q9P035 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HACD3Q9P035 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HACD3Q9P035 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.79■□□□□ 0.92
HACD3Q9P035 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.78■□□□□ 0.92
HACD3Q9P035 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.78■□□□□ 0.92
HACD3Q9P035 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
HACD3Q9P035 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.78■□□□□ 0.92
HACD3Q9P035 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HACD3Q9P035 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.78■□□□□ 0.92
HACD3Q9P035 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HACD3Q9P035 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HACD3Q9P035 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HACD3Q9P035 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
HACD3Q9P035 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HACD3Q9P035 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.78■□□□□ 0.92
HACD3Q9P035 TERF1P5-201ENST00000477545 1207 ntBASIC20.78■□□□□ 0.92
HACD3Q9P035 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HACD3Q9P035 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HACD3Q9P035 MFSD11-216ENST00000590393 1141 ntBASIC20.78■□□□□ 0.92
HACD3Q9P035 BID-214ENST00000617586 542 ntTSL 5 BASIC20.78■□□□□ 0.92
HACD3Q9P035 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HACD3Q9P035 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HACD3Q9P035 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HACD3Q9P035 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HACD3Q9P035 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HACD3Q9P035 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.77■□□□□ 0.92
HACD3Q9P035 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.77■□□□□ 0.92
HACD3Q9P035 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
HACD3Q9P035 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.77■□□□□ 0.92
HACD3Q9P035 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HACD3Q9P035 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HACD3Q9P035 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.77■□□□□ 0.92
HACD3Q9P035 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HACD3Q9P035 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
HACD3Q9P035 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HACD3Q9P035 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HACD3Q9P035 AC091799.1-201ENST00000422823 811 ntBASIC20.77■□□□□ 0.92
HACD3Q9P035 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.77■□□□□ 0.92
HACD3Q9P035 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.77■□□□□ 0.92
HACD3Q9P035 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.77■□□□□ 0.92
HACD3Q9P035 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.77■□□□□ 0.92
HACD3Q9P035 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
HACD3Q9P035 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
HACD3Q9P035 AC013268.1-206ENST00000638368 961 ntBASIC20.77■□□□□ 0.92
HACD3Q9P035 AC112229.1-201ENST00000639295 961 ntBASIC20.77■□□□□ 0.92
HACD3Q9P035 AC121338.2-201ENST00000622535 1744 ntBASIC20.77■□□□□ 0.92
HACD3Q9P035 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
HACD3Q9P035 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.77■□□□□ 0.91
HACD3Q9P035 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HACD3Q9P035 AL121603.2-201ENST00000557373 2117 ntBASIC20.77■□□□□ 0.91
HACD3Q9P035 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
HACD3Q9P035 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms