Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COMMD9Q9P000 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COMMD9Q9P000 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COMMD9Q9P000 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
COMMD9Q9P000 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COMMD9Q9P000 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
COMMD9Q9P000 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COMMD9Q9P000 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COMMD9Q9P000 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COMMD9Q9P000 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COMMD9Q9P000 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.52■□□□□ 0.39
COMMD9Q9P000 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD9Q9P000 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD9Q9P000 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD9Q9P000 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
COMMD9Q9P000 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD9Q9P000 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD9Q9P000 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD9Q9P000 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.51■□□□□ 0.39
COMMD9Q9P000 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD9Q9P000 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD9Q9P000 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.51■□□□□ 0.39
COMMD9Q9P000 AC079089.2-201ENST00000531211 1277 ntBASIC17.51■□□□□ 0.39
COMMD9Q9P000 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
COMMD9Q9P000 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.51■□□□□ 0.39
COMMD9Q9P000 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.51■□□□□ 0.39
COMMD9Q9P000 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.51■□□□□ 0.39
COMMD9Q9P000 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
COMMD9Q9P000 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD9Q9P000 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD9Q9P000 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COMMD9Q9P000 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD9Q9P000 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD9Q9P000 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD9Q9P000 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD9Q9P000 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD9Q9P000 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD9Q9P000 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
COMMD9Q9P000 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.5■□□□□ 0.39
COMMD9Q9P000 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.5■□□□□ 0.39
COMMD9Q9P000 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.5■□□□□ 0.39
COMMD9Q9P000 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.5■□□□□ 0.39
COMMD9Q9P000 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.5■□□□□ 0.39
COMMD9Q9P000 AC068587.7-201ENST00000641602 218 ntBASIC17.5■□□□□ 0.39
COMMD9Q9P000 AC006128.1-201ENST00000624704 1661 ntBASIC17.5■□□□□ 0.39
COMMD9Q9P000 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
COMMD9Q9P000 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD9Q9P000 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.5■□□□□ 0.39
COMMD9Q9P000 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COMMD9Q9P000 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD9Q9P000 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
COMMD9Q9P000 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD9Q9P000 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD9Q9P000 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD9Q9P000 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD9Q9P000 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD9Q9P000 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD9Q9P000 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
COMMD9Q9P000 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.49■□□□□ 0.39
COMMD9Q9P000 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD9Q9P000 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD9Q9P000 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD9Q9P000 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD9Q9P000 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD9Q9P000 KRT16P3-201ENST00000439127 1283 ntBASIC17.49■□□□□ 0.39
COMMD9Q9P000 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.49■□□□□ 0.39
COMMD9Q9P000 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD9Q9P000 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
COMMD9Q9P000 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.49■□□□□ 0.39
COMMD9Q9P000 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
COMMD9Q9P000 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD9Q9P000 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD9Q9P000 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
COMMD9Q9P000 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD9Q9P000 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD9Q9P000 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
COMMD9Q9P000 AC026471.6-201ENST00000622954 1905 ntBASIC17.49■□□□□ 0.39
COMMD9Q9P000 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
COMMD9Q9P000 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.48■□□□□ 0.39
COMMD9Q9P000 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.48■□□□□ 0.39
COMMD9Q9P000 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.48■□□□□ 0.39
COMMD9Q9P000 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
COMMD9Q9P000 pRNA.6-201ENST00000610482 90 ntBASIC17.48■□□□□ 0.39
COMMD9Q9P000 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.48■□□□□ 0.39
COMMD9Q9P000 pRNA.5-201ENST00000612139 90 ntBASIC17.48■□□□□ 0.39
COMMD9Q9P000 pRNA.11-201ENST00000618423 90 ntBASIC17.48■□□□□ 0.39
COMMD9Q9P000 pRNA.13-201ENST00000619112 90 ntBASIC17.48■□□□□ 0.39
COMMD9Q9P000 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms