Protein–RNA interactions for Protein: Q9NXJ0

MS4A12, Membrane-spanning 4-domains subfamily A member 12, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A12Q9NXJ0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A12Q9NXJ0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A12Q9NXJ0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A12Q9NXJ0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.63■□□□□ 0.73
MS4A12Q9NXJ0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A12Q9NXJ0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A12Q9NXJ0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
MS4A12Q9NXJ0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.63■□□□□ 0.73
MS4A12Q9NXJ0 AC006015.1-201ENST00000429970 570 ntBASIC19.63■□□□□ 0.73
MS4A12Q9NXJ0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A12Q9NXJ0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.63■□□□□ 0.73
MS4A12Q9NXJ0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A12Q9NXJ0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.63■□□□□ 0.73
MS4A12Q9NXJ0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A12Q9NXJ0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 RBM17P2-201ENST00000616397 1405 ntBASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 AC022517.1-201ENST00000592429 346 ntBASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MS4A12Q9NXJ0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A12Q9NXJ0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 AC010536.3-201ENST00000620306 533 ntBASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A12Q9NXJ0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.59■□□□□ 0.73
MS4A12Q9NXJ0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.59■□□□□ 0.73
MS4A12Q9NXJ0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A12Q9NXJ0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
MS4A12Q9NXJ0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A12Q9NXJ0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.59■□□□□ 0.73
MS4A12Q9NXJ0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.59■□□□□ 0.73
MS4A12Q9NXJ0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.59■□□□□ 0.73
MS4A12Q9NXJ0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A12Q9NXJ0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A12Q9NXJ0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.59■□□□□ 0.73
MS4A12Q9NXJ0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A12Q9NXJ0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A12Q9NXJ0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.59■□□□□ 0.73
MS4A12Q9NXJ0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.58■□□□□ 0.73
MS4A12Q9NXJ0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MS4A12Q9NXJ0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MS4A12Q9NXJ0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MS4A12Q9NXJ0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MS4A12Q9NXJ0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.58■□□□□ 0.73
MS4A12Q9NXJ0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MS4A12Q9NXJ0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MS4A12Q9NXJ0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MS4A12Q9NXJ0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MS4A12Q9NXJ0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms