Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 NCF1B-203ENST00000435988 1254 ntBASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CUEDC1Q9NWM3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CUEDC1Q9NWM3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CUEDC1Q9NWM3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CUEDC1Q9NWM3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CUEDC1Q9NWM3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.91■□□□□ 0.78
CUEDC1Q9NWM3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.91■□□□□ 0.78
CUEDC1Q9NWM3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.91■□□□□ 0.78
CUEDC1Q9NWM3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.91■□□□□ 0.78
CUEDC1Q9NWM3 PLK5-205ENST00000642079 1969 ntBASIC19.91■□□□□ 0.78
CUEDC1Q9NWM3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CUEDC1Q9NWM3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.91■□□□□ 0.78
CUEDC1Q9NWM3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CUEDC1Q9NWM3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CUEDC1Q9NWM3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 PKD1P6-201ENST00000343738 4769 ntBASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 AC007322.4-201ENST00000509611 723 ntBASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 AC121338.2-201ENST00000622535 1744 ntBASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.9■□□□□ 0.78
CUEDC1Q9NWM3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CUEDC1Q9NWM3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CUEDC1Q9NWM3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CUEDC1Q9NWM3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CUEDC1Q9NWM3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CUEDC1Q9NWM3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CUEDC1Q9NWM3 AC007322.1-201ENST00000426983 750 ntBASIC19.89■□□□□ 0.77
CUEDC1Q9NWM3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CUEDC1Q9NWM3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CUEDC1Q9NWM3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CUEDC1Q9NWM3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CUEDC1Q9NWM3 AC231657.2-201ENST00000624556 255 ntBASIC19.89■□□□□ 0.77
CUEDC1Q9NWM3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CUEDC1Q9NWM3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.89■□□□□ 0.77
CUEDC1Q9NWM3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 AC068338.2-201ENST00000563278 1430 ntBASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 CROCCP5-201ENST00000436658 830 ntBASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 AC116050.2-201ENST00000612102 1779 ntBASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CUEDC1Q9NWM3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUEDC1Q9NWM3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUEDC1Q9NWM3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CUEDC1Q9NWM3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUEDC1Q9NWM3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUEDC1Q9NWM3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUEDC1Q9NWM3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUEDC1Q9NWM3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.87■□□□□ 0.77
CUEDC1Q9NWM3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.87■□□□□ 0.77
CUEDC1Q9NWM3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUEDC1Q9NWM3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.87■□□□□ 0.77
CUEDC1Q9NWM3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CUEDC1Q9NWM3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.87■□□□□ 0.77
CUEDC1Q9NWM3 AC016405.3-201ENST00000607710 860 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms