Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.9■■□□□ 1.58
CWC22Q9HCG8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CWC22Q9HCG8 CD99P1-205ENST00000527459 561 ntBASIC24.9■■□□□ 1.58
CWC22Q9HCG8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.9■■□□□ 1.58
CWC22Q9HCG8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.9■■□□□ 1.58
CWC22Q9HCG8 AC231657.2-201ENST00000624556 255 ntBASIC24.9■■□□□ 1.58
CWC22Q9HCG8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CWC22Q9HCG8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CWC22Q9HCG8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
CWC22Q9HCG8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CWC22Q9HCG8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.9■■□□□ 1.58
CWC22Q9HCG8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CWC22Q9HCG8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
CWC22Q9HCG8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.89■■□□□ 1.58
CWC22Q9HCG8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CWC22Q9HCG8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.58
CWC22Q9HCG8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CWC22Q9HCG8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CWC22Q9HCG8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CWC22Q9HCG8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.89■■□□□ 1.58
CWC22Q9HCG8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CWC22Q9HCG8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.89■■□□□ 1.58
CWC22Q9HCG8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CWC22Q9HCG8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CWC22Q9HCG8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
CWC22Q9HCG8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CWC22Q9HCG8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CWC22Q9HCG8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CWC22Q9HCG8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CWC22Q9HCG8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
CWC22Q9HCG8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.89■■□□□ 1.57
CWC22Q9HCG8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CWC22Q9HCG8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CWC22Q9HCG8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.88■■□□□ 1.57
CWC22Q9HCG8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC24.88■■□□□ 1.57
CWC22Q9HCG8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.88■■□□□ 1.57
CWC22Q9HCG8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CWC22Q9HCG8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.88■■□□□ 1.57
CWC22Q9HCG8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CWC22Q9HCG8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.88■■□□□ 1.57
CWC22Q9HCG8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CWC22Q9HCG8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CWC22Q9HCG8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.87■■□□□ 1.57
CWC22Q9HCG8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CWC22Q9HCG8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.87■■□□□ 1.57
CWC22Q9HCG8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.87■■□□□ 1.57
CWC22Q9HCG8 AC083906.2-201ENST00000511578 360 ntBASIC24.87■■□□□ 1.57
CWC22Q9HCG8 UBE2DNL-204ENST00000602536 740 ntBASIC24.87■■□□□ 1.57
CWC22Q9HCG8 AC005181.1-201ENST00000604782 1256 ntBASIC24.87■■□□□ 1.57
CWC22Q9HCG8 TMEM191A-211ENST00000637163 1067 ntBASIC24.87■■□□□ 1.57
CWC22Q9HCG8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CWC22Q9HCG8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CWC22Q9HCG8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CWC22Q9HCG8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
CWC22Q9HCG8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CWC22Q9HCG8 AC092667.1-201ENST00000434301 2586 ntBASIC24.87■■□□□ 1.57
CWC22Q9HCG8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 AP004607.7-201ENST00000527152 1677 ntBASIC24.86■■□□□ 1.57
CWC22Q9HCG8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 SLC29A4P1-201ENST00000398760 971 ntBASIC24.86■■□□□ 1.57
CWC22Q9HCG8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 AL121603.2-201ENST00000557373 2117 ntBASIC24.86■■□□□ 1.57
CWC22Q9HCG8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
CWC22Q9HCG8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
CWC22Q9HCG8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC24.85■■□□□ 1.57
CWC22Q9HCG8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.85■■□□□ 1.57
CWC22Q9HCG8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CWC22Q9HCG8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.85■■□□□ 1.57
CWC22Q9HCG8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.85■■□□□ 1.57
CWC22Q9HCG8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.85■■□□□ 1.57
CWC22Q9HCG8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CWC22Q9HCG8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CWC22Q9HCG8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CWC22Q9HCG8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.85■■□□□ 1.57
CWC22Q9HCG8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.85■■□□□ 1.57
CWC22Q9HCG8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
CWC22Q9HCG8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CWC22Q9HCG8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
CWC22Q9HCG8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CWC22Q9HCG8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.84■■□□□ 1.57
CWC22Q9HCG8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CWC22Q9HCG8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CWC22Q9HCG8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CWC22Q9HCG8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CWC22Q9HCG8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.84■■□□□ 1.57
CWC22Q9HCG8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.84■■□□□ 1.57
CWC22Q9HCG8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CWC22Q9HCG8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms