Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
EBF3Q9H4W6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.48■■□□□ 1.03
EBF3Q9H4W6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EBF3Q9H4W6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EBF3Q9H4W6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
EBF3Q9H4W6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EBF3Q9H4W6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
EBF3Q9H4W6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.47■■□□□ 1.03
EBF3Q9H4W6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.47■■□□□ 1.03
EBF3Q9H4W6 RPS2P52-201ENST00000469610 820 ntBASIC21.47■■□□□ 1.03
EBF3Q9H4W6 CDV3P1-201ENST00000471403 739 ntBASIC21.47■■□□□ 1.03
EBF3Q9H4W6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.47■■□□□ 1.03
EBF3Q9H4W6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.47■■□□□ 1.03
EBF3Q9H4W6 FAM21FP-204ENST00000608637 956 ntBASIC21.47■■□□□ 1.03
EBF3Q9H4W6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.47■■□□□ 1.03
EBF3Q9H4W6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.47■■□□□ 1.03
EBF3Q9H4W6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
EBF3Q9H4W6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EBF3Q9H4W6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.47■■□□□ 1.03
EBF3Q9H4W6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 AC098590.1-201ENST00000468126 897 ntBASIC21.46■■□□□ 1.03
EBF3Q9H4W6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 AC006058.3-201ENST00000606217 1069 ntBASIC21.46■■□□□ 1.03
EBF3Q9H4W6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EBF3Q9H4W6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
EBF3Q9H4W6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
EBF3Q9H4W6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
EBF3Q9H4W6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
EBF3Q9H4W6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
EBF3Q9H4W6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
EBF3Q9H4W6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EBF3Q9H4W6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 CYP2T3P-201ENST00000601990 817 ntBASIC21.44■■□□□ 1.02
EBF3Q9H4W6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 AL121603.2-201ENST00000557373 2117 ntBASIC21.44■■□□□ 1.02
EBF3Q9H4W6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EBF3Q9H4W6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
EBF3Q9H4W6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EBF3Q9H4W6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EBF3Q9H4W6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EBF3Q9H4W6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
EBF3Q9H4W6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
EBF3Q9H4W6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.43■■□□□ 1.02
EBF3Q9H4W6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.43■■□□□ 1.02
EBF3Q9H4W6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.43■■□□□ 1.02
EBF3Q9H4W6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms