Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ALX4Q9H161 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ALX4Q9H161 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ALX4Q9H161 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.38■□□□□ 0.37
ALX4Q9H161 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX4Q9H161 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX4Q9H161 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX4Q9H161 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.38■□□□□ 0.37
ALX4Q9H161 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ALX4Q9H161 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ALX4Q9H161 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX4Q9H161 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.38■□□□□ 0.37
ALX4Q9H161 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.38■□□□□ 0.37
ALX4Q9H161 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX4Q9H161 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX4Q9H161 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
ALX4Q9H161 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALX4Q9H161 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALX4Q9H161 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
ALX4Q9H161 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALX4Q9H161 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ALX4Q9H161 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.37■□□□□ 0.37
ALX4Q9H161 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.37■□□□□ 0.37
ALX4Q9H161 AC087239.1-201ENST00000622671 572 ntBASIC17.37■□□□□ 0.37
ALX4Q9H161 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.37■□□□□ 0.37
ALX4Q9H161 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX4Q9H161 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ALX4Q9H161 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX4Q9H161 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX4Q9H161 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.37■□□□□ 0.37
ALX4Q9H161 TCF3P1-201ENST00000423021 1937 ntBASIC17.37■□□□□ 0.37
ALX4Q9H161 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX4Q9H161 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALX4Q9H161 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX4Q9H161 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX4Q9H161 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
ALX4Q9H161 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.36■□□□□ 0.37
ALX4Q9H161 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.36■□□□□ 0.37
ALX4Q9H161 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.36■□□□□ 0.37
ALX4Q9H161 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ALX4Q9H161 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX4Q9H161 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX4Q9H161 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX4Q9H161 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX4Q9H161 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.36■□□□□ 0.37
ALX4Q9H161 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.36■□□□□ 0.37
ALX4Q9H161 AL139246.5-201ENST00000606645 996 ntBASIC17.36■□□□□ 0.37
ALX4Q9H161 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.36■□□□□ 0.37
ALX4Q9H161 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX4Q9H161 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX4Q9H161 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX4Q9H161 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX4Q9H161 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX4Q9H161 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX4Q9H161 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX4Q9H161 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALX4Q9H161 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ALX4Q9H161 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX4Q9H161 TNXA-203ENST00000507684 2038 ntBASIC17.35■□□□□ 0.37
ALX4Q9H161 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX4Q9H161 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX4Q9H161 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ALX4Q9H161 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.35■□□□□ 0.37
ALX4Q9H161 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX4Q9H161 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX4Q9H161 PBX2P1-201ENST00000493219 1291 ntBASIC17.35■□□□□ 0.37
ALX4Q9H161 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ALX4Q9H161 AL136162.1-201ENST00000607711 1078 ntBASIC17.35■□□□□ 0.37
ALX4Q9H161 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX4Q9H161 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ALX4Q9H161 SYT6-210ENST00000641643 1587 ntBASIC17.35■□□□□ 0.37
ALX4Q9H161 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX4Q9H161 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ALX4Q9H161 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.35■□□□□ 0.37
ALX4Q9H161 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.35■□□□□ 0.37
ALX4Q9H161 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.35■□□□□ 0.37
ALX4Q9H161 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ALX4Q9H161 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX4Q9H161 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALX4Q9H161 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALX4Q9H161 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALX4Q9H161 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALX4Q9H161 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ALX4Q9H161 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.34■□□□□ 0.37
ALX4Q9H161 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ALX4Q9H161 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALX4Q9H161 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.34■□□□□ 0.37
ALX4Q9H161 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALX4Q9H161 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALX4Q9H161 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALX4Q9H161 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.34■□□□□ 0.37
ALX4Q9H161 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALX4Q9H161 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.34■□□□□ 0.37
ALX4Q9H161 AC133637.1-201ENST00000624115 1537 ntBASIC17.34■□□□□ 0.37
ALX4Q9H161 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALX4Q9H161 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALX4Q9H161 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALX4Q9H161 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALX4Q9H161 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALX4Q9H161 AP000974.1-201ENST00000623909 2387 ntBASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms