Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LSG1Q9H089 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
LSG1Q9H089 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LSG1Q9H089 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LSG1Q9H089 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
LSG1Q9H089 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LSG1Q9H089 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LSG1Q9H089 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LSG1Q9H089 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.69■■□□□ 1.54
LSG1Q9H089 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LSG1Q9H089 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LSG1Q9H089 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
LSG1Q9H089 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.69■■□□□ 1.54
LSG1Q9H089 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.69■■□□□ 1.54
LSG1Q9H089 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.69■■□□□ 1.54
LSG1Q9H089 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.69■■□□□ 1.54
LSG1Q9H089 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.69■■□□□ 1.54
LSG1Q9H089 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LSG1Q9H089 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
LSG1Q9H089 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
LSG1Q9H089 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LSG1Q9H089 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LSG1Q9H089 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LSG1Q9H089 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
LSG1Q9H089 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.68■■□□□ 1.54
LSG1Q9H089 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.68■■□□□ 1.54
LSG1Q9H089 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.68■■□□□ 1.54
LSG1Q9H089 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
LSG1Q9H089 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LSG1Q9H089 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC24.68■■□□□ 1.54
LSG1Q9H089 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
LSG1Q9H089 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LSG1Q9H089 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
LSG1Q9H089 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LSG1Q9H089 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.67■■□□□ 1.54
LSG1Q9H089 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.67■■□□□ 1.54
LSG1Q9H089 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LSG1Q9H089 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
LSG1Q9H089 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.67■■□□□ 1.54
LSG1Q9H089 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.67■■□□□ 1.54
LSG1Q9H089 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
LSG1Q9H089 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.67■■□□□ 1.54
LSG1Q9H089 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
LSG1Q9H089 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
LSG1Q9H089 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LSG1Q9H089 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LSG1Q9H089 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC24.66■■□□□ 1.54
LSG1Q9H089 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
LSG1Q9H089 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
LSG1Q9H089 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
LSG1Q9H089 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LSG1Q9H089 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
LSG1Q9H089 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
LSG1Q9H089 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
LSG1Q9H089 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LSG1Q9H089 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.66■■□□□ 1.54
LSG1Q9H089 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.66■■□□□ 1.54
LSG1Q9H089 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.66■■□□□ 1.54
LSG1Q9H089 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LSG1Q9H089 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.66■■□□□ 1.54
LSG1Q9H089 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LSG1Q9H089 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
LSG1Q9H089 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LSG1Q9H089 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
LSG1Q9H089 AC020907.5-201ENST00000624372 1936 ntBASIC24.65■■□□□ 1.54
LSG1Q9H089 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
LSG1Q9H089 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC24.65■■□□□ 1.54
LSG1Q9H089 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.65■■□□□ 1.54
LSG1Q9H089 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.65■■□□□ 1.54
LSG1Q9H089 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LSG1Q9H089 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.64■■□□□ 1.54
LSG1Q9H089 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
LSG1Q9H089 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
LSG1Q9H089 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.64■■□□□ 1.54
LSG1Q9H089 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
LSG1Q9H089 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.64■■□□□ 1.54
LSG1Q9H089 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.64■■□□□ 1.54
LSG1Q9H089 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
LSG1Q9H089 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
LSG1Q9H089 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.64■■□□□ 1.54
LSG1Q9H089 AC010536.3-201ENST00000620306 533 ntBASIC24.64■■□□□ 1.54
LSG1Q9H089 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
LSG1Q9H089 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
LSG1Q9H089 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LSG1Q9H089 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
LSG1Q9H089 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
LSG1Q9H089 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
LSG1Q9H089 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LSG1Q9H089 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.64■■□□□ 1.53
LSG1Q9H089 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LSG1Q9H089 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
LSG1Q9H089 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.63■■□□□ 1.53
LSG1Q9H089 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
LSG1Q9H089 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LSG1Q9H089 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
LSG1Q9H089 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
LSG1Q9H089 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.63■■□□□ 1.53
LSG1Q9H089 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LSG1Q9H089 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.63■■□□□ 1.53
LSG1Q9H089 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms