Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
RPAP1Q9BWH6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC25.11■■□□□ 1.61
RPAP1Q9BWH6 AC008687.6-201ENST00000596318 630 ntBASIC25.11■■□□□ 1.61
RPAP1Q9BWH6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.11■■□□□ 1.61
RPAP1Q9BWH6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.11■■□□□ 1.61
RPAP1Q9BWH6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.11■■□□□ 1.61
RPAP1Q9BWH6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.11■■□□□ 1.61
RPAP1Q9BWH6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.1■■□□□ 1.61
RPAP1Q9BWH6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
RPAP1Q9BWH6 AC061975.6-201ENST00000579045 1553 ntBASIC25.1■■□□□ 1.61
RPAP1Q9BWH6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.1■■□□□ 1.61
RPAP1Q9BWH6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RPAP1Q9BWH6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.1■■□□□ 1.61
RPAP1Q9BWH6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC25.1■■□□□ 1.61
RPAP1Q9BWH6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPAP1Q9BWH6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.1■■□□□ 1.61
RPAP1Q9BWH6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPAP1Q9BWH6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RPAP1Q9BWH6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPAP1Q9BWH6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RPAP1Q9BWH6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC25.1■■□□□ 1.61
RPAP1Q9BWH6 BX276092.2-201ENST00000417668 665 ntBASIC25.09■■□□□ 1.61
RPAP1Q9BWH6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC25.09■■□□□ 1.61
RPAP1Q9BWH6 RARRES2P4-201ENST00000514074 484 ntBASIC25.09■■□□□ 1.61
RPAP1Q9BWH6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC25.09■■□□□ 1.61
RPAP1Q9BWH6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RPAP1Q9BWH6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC25.09■■□□□ 1.61
RPAP1Q9BWH6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RPAP1Q9BWH6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RPAP1Q9BWH6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RPAP1Q9BWH6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.08■■□□□ 1.61
RPAP1Q9BWH6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC25.08■■□□□ 1.61
RPAP1Q9BWH6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC25.08■■□□□ 1.61
RPAP1Q9BWH6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.08■■□□□ 1.61
RPAP1Q9BWH6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC25.08■■□□□ 1.61
RPAP1Q9BWH6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RPAP1Q9BWH6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.08■■□□□ 1.61
RPAP1Q9BWH6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RPAP1Q9BWH6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.08■■□□□ 1.61
RPAP1Q9BWH6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
RPAP1Q9BWH6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RPAP1Q9BWH6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
RPAP1Q9BWH6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RPAP1Q9BWH6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RPAP1Q9BWH6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RPAP1Q9BWH6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
RPAP1Q9BWH6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RPAP1Q9BWH6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.06■■□□□ 1.6
RPAP1Q9BWH6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC25.06■■□□□ 1.6
RPAP1Q9BWH6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RPAP1Q9BWH6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.06■■□□□ 1.6
RPAP1Q9BWH6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RPAP1Q9BWH6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
RPAP1Q9BWH6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.06■■□□□ 1.6
RPAP1Q9BWH6 AC010980.2-201ENST00000587099 1412 ntBASIC25.06■■□□□ 1.6
RPAP1Q9BWH6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 PRORSD1P-201ENST00000295112 541 ntBASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 AC091874.3-201ENST00000512672 1195 ntBASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 AL591742.1-201ENST00000604433 565 ntBASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 AC093827.2-201ENST00000512654 315 ntBASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC25.05■■□□□ 1.6
RPAP1Q9BWH6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
RPAP1Q9BWH6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RPAP1Q9BWH6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RPAP1Q9BWH6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC25.04■■□□□ 1.6
RPAP1Q9BWH6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RPAP1Q9BWH6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RPAP1Q9BWH6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RPAP1Q9BWH6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms