Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 BX664615.1-201ENST00000443558 458 ntBASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 DUSP8P4-201ENST00000399538 1761 ntBASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRFN3Q9BTN0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRFN3Q9BTN0 AC246785.2-201ENST00000432512 513 ntBASIC20.86■□□□□ 0.93
LRFN3Q9BTN0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.86■□□□□ 0.93
LRFN3Q9BTN0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.86■□□□□ 0.93
LRFN3Q9BTN0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.86■□□□□ 0.93
LRFN3Q9BTN0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRFN3Q9BTN0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.86■□□□□ 0.93
LRFN3Q9BTN0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.86■□□□□ 0.93
LRFN3Q9BTN0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LRFN3Q9BTN0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRFN3Q9BTN0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRFN3Q9BTN0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRFN3Q9BTN0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
LRFN3Q9BTN0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LRFN3Q9BTN0 HCG4P8-203ENST00000443049 980 ntBASIC20.85■□□□□ 0.93
LRFN3Q9BTN0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LRFN3Q9BTN0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.85■□□□□ 0.93
LRFN3Q9BTN0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.85■□□□□ 0.93
LRFN3Q9BTN0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.85■□□□□ 0.93
LRFN3Q9BTN0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.85■□□□□ 0.93
LRFN3Q9BTN0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LRFN3Q9BTN0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LRFN3Q9BTN0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 FAM8A6P-201ENST00000407496 1135 ntBASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 AC004263.2-201ENST00000617183 678 ntBASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
LRFN3Q9BTN0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.83■□□□□ 0.93
LRFN3Q9BTN0 CYP21A1P-202ENST00000354927 1481 ntBASIC20.83■□□□□ 0.93
LRFN3Q9BTN0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRFN3Q9BTN0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRFN3Q9BTN0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.83■□□□□ 0.93
LRFN3Q9BTN0 AC245052.3-201ENST00000450182 901 ntBASIC20.83■□□□□ 0.93
LRFN3Q9BTN0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRFN3Q9BTN0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.83■□□□□ 0.93
LRFN3Q9BTN0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.83■□□□□ 0.93
LRFN3Q9BTN0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.83■□□□□ 0.92
LRFN3Q9BTN0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.83■□□□□ 0.92
LRFN3Q9BTN0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 LINC00526-201ENST00000581067 1875 ntBASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 PCED1CP-201ENST00000419887 785 ntBASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 KRT18P16-201ENST00000510337 1294 ntBASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
LRFN3Q9BTN0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 AP003733.4-201ENST00000623785 1697 ntBASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms