Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 SLC25A24-204ENST00000569674 2357 ntBASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 AC092437.1-201ENST00000624794 1048 ntBASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN4Q96NZ1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.46■□□□□ 0.54
FOXN4Q96NZ1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 AC004911.1-201ENST00000416316 871 ntBASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
FOXN4Q96NZ1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 FEM1AP1-201ENST00000431297 1995 ntBASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXN4Q96NZ1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 AP004607.4-201ENST00000530158 1459 ntBASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 AL391422.3-201ENST00000603791 2761 ntBASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 PCDHAC2-203ENST00000615316 3011 ntBASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN4Q96NZ1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN4Q96NZ1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms