Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.41■□□□□ 0.86
CFAP54Q96N23 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CFAP54Q96N23 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
CFAP54Q96N23 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CFAP54Q96N23 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CFAP54Q96N23 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CFAP54Q96N23 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.41■□□□□ 0.86
CFAP54Q96N23 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CFAP54Q96N23 AC027702.1-201ENST00000563810 1770 ntBASIC20.4■□□□□ 0.86
CFAP54Q96N23 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CFAP54Q96N23 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.4■□□□□ 0.86
CFAP54Q96N23 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.4■□□□□ 0.86
CFAP54Q96N23 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.4■□□□□ 0.86
CFAP54Q96N23 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CFAP54Q96N23 LINC01568-207ENST00000641790 1380 ntBASIC20.4■□□□□ 0.86
CFAP54Q96N23 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CFAP54Q96N23 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CFAP54Q96N23 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CFAP54Q96N23 NUDT16P1-203ENST00000513809 620 ntBASIC20.4■□□□□ 0.86
CFAP54Q96N23 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.4■□□□□ 0.86
CFAP54Q96N23 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.4■□□□□ 0.86
CFAP54Q96N23 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.4■□□□□ 0.86
CFAP54Q96N23 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.4■□□□□ 0.86
CFAP54Q96N23 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
CFAP54Q96N23 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.4■□□□□ 0.86
CFAP54Q96N23 AC105020.6-201ENST00000621523 1217 ntBASIC20.4■□□□□ 0.86
CFAP54Q96N23 AC010947.1-201ENST00000623454 693 ntBASIC20.4■□□□□ 0.86
CFAP54Q96N23 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.4■□□□□ 0.86
CFAP54Q96N23 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.4■□□□□ 0.86
CFAP54Q96N23 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CFAP54Q96N23 AC079598.2-202ENST00000546624 1451 ntBASIC20.39■□□□□ 0.86
CFAP54Q96N23 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CFAP54Q96N23 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CFAP54Q96N23 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CFAP54Q96N23 SLC25A3P1-201ENST00000443844 931 ntBASIC20.39■□□□□ 0.85
CFAP54Q96N23 RBM17P1-201ENST00000453646 1190 ntBASIC20.39■□□□□ 0.85
CFAP54Q96N23 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.39■□□□□ 0.85
CFAP54Q96N23 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CFAP54Q96N23 AF186192.3-201ENST00000583427 947 ntBASIC20.39■□□□□ 0.85
CFAP54Q96N23 AC053503.5-201ENST00000601508 636 ntBASIC20.39■□□□□ 0.85
CFAP54Q96N23 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CFAP54Q96N23 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
CFAP54Q96N23 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.39■□□□□ 0.85
CFAP54Q96N23 AL139125.2-201ENST00000623134 1869 ntBASIC20.39■□□□□ 0.85
CFAP54Q96N23 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.39■□□□□ 0.85
CFAP54Q96N23 AC087633.2-202ENST00000565166 1439 ntBASIC20.39■□□□□ 0.85
CFAP54Q96N23 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CFAP54Q96N23 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.39■□□□□ 0.85
CFAP54Q96N23 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.39■□□□□ 0.85
CFAP54Q96N23 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CFAP54Q96N23 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.39■□□□□ 0.85
CFAP54Q96N23 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CFAP54Q96N23 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.38■□□□□ 0.85
CFAP54Q96N23 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP54Q96N23 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP54Q96N23 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.38■□□□□ 0.85
CFAP54Q96N23 MYC-208ENST00000641036 567 ntBASIC20.38■□□□□ 0.85
CFAP54Q96N23 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP54Q96N23 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CFAP54Q96N23 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.38■□□□□ 0.85
CFAP54Q96N23 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP54Q96N23 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP54Q96N23 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP54Q96N23 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP54Q96N23 LINC01960-201ENST00000563759 1884 ntBASIC20.38■□□□□ 0.85
CFAP54Q96N23 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP54Q96N23 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.38■□□□□ 0.85
CFAP54Q96N23 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP54Q96N23 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP54Q96N23 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
CFAP54Q96N23 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP54Q96N23 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.38■□□□□ 0.85
CFAP54Q96N23 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CFAP54Q96N23 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.38■□□□□ 0.85
CFAP54Q96N23 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.38■□□□□ 0.85
CFAP54Q96N23 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP54Q96N23 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CFAP54Q96N23 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CFAP54Q96N23 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.38■□□□□ 0.85
CFAP54Q96N23 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CFAP54Q96N23 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CFAP54Q96N23 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CFAP54Q96N23 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CFAP54Q96N23 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.37■□□□□ 0.85
CFAP54Q96N23 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CFAP54Q96N23 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CFAP54Q96N23 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CFAP54Q96N23 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CFAP54Q96N23 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.37■□□□□ 0.85
CFAP54Q96N23 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CFAP54Q96N23 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CFAP54Q96N23 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CFAP54Q96N23 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CFAP54Q96N23 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CFAP54Q96N23 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.37■□□□□ 0.85
CFAP54Q96N23 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CFAP54Q96N23 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CFAP54Q96N23 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CFAP54Q96N23 AL137013.1-201ENST00000432946 1228 ntBASIC20.36■□□□□ 0.85
CFAP54Q96N23 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms