Protein–RNA interactions for Protein: Q96I76

GPATCH3, G patch domain-containing protein 3, humanhuman

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3Q96I76 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
GPATCH3Q96I76 AC006128.1-201ENST00000624704 1661 ntBASIC25.26■■□□□ 1.63
GPATCH3Q96I76 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
GPATCH3Q96I76 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
GPATCH3Q96I76 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
GPATCH3Q96I76 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
GPATCH3Q96I76 CNN2P6-201ENST00000439038 900 ntBASIC25.25■■□□□ 1.63
GPATCH3Q96I76 AC080038.1-201ENST00000611274 1154 ntBASIC25.25■■□□□ 1.63
GPATCH3Q96I76 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
GPATCH3Q96I76 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
GPATCH3Q96I76 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.25■■□□□ 1.63
GPATCH3Q96I76 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
GPATCH3Q96I76 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.24■■□□□ 1.63
GPATCH3Q96I76 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 AC007322.1-201ENST00000426983 750 ntBASIC25.24■■□□□ 1.63
GPATCH3Q96I76 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
GPATCH3Q96I76 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 AC092666.2-201ENST00000613287 246 ntBASIC25.23■■□□□ 1.63
GPATCH3Q96I76 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
GPATCH3Q96I76 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
GPATCH3Q96I76 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 FAM21FP-204ENST00000608637 956 ntBASIC25.21■■□□□ 1.63
GPATCH3Q96I76 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
GPATCH3Q96I76 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC25.2■■□□□ 1.63
GPATCH3Q96I76 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
GPATCH3Q96I76 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
GPATCH3Q96I76 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.2■■□□□ 1.62
GPATCH3Q96I76 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
GPATCH3Q96I76 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC25.2■■□□□ 1.62
GPATCH3Q96I76 BET1L-204ENST00000410108 637 ntTSL 3 BASIC25.2■■□□□ 1.62
GPATCH3Q96I76 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.2■■□□□ 1.62
GPATCH3Q96I76 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.2■■□□□ 1.62
GPATCH3Q96I76 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.2■■□□□ 1.62
GPATCH3Q96I76 AC073111.5-205ENST00000641717 521 ntBASIC25.2■■□□□ 1.62
GPATCH3Q96I76 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
GPATCH3Q96I76 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
GPATCH3Q96I76 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
GPATCH3Q96I76 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.19■■□□□ 1.62
GPATCH3Q96I76 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
GPATCH3Q96I76 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.19■■□□□ 1.62
GPATCH3Q96I76 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
GPATCH3Q96I76 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
GPATCH3Q96I76 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms