Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 UNC93B4-201ENST00000505679 747 ntBASIC20.72■□□□□ 0.91
SIPA1Q96FS4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 AC105020.6-201ENST00000621523 1217 ntBASIC20.72■□□□□ 0.91
SIPA1Q96FS4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 AC233723.2-201ENST00000623798 2106 ntBASIC20.71■□□□□ 0.91
SIPA1Q96FS4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.71■□□□□ 0.91
SIPA1Q96FS4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.71■□□□□ 0.91
SIPA1Q96FS4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SIPA1Q96FS4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIPA1Q96FS4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.69■□□□□ 0.9
SIPA1Q96FS4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIPA1Q96FS4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIPA1Q96FS4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.69■□□□□ 0.9
SIPA1Q96FS4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.69■□□□□ 0.9
SIPA1Q96FS4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIPA1Q96FS4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.69■□□□□ 0.9
SIPA1Q96FS4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIPA1Q96FS4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIPA1Q96FS4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.69■□□□□ 0.9
SIPA1Q96FS4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.69■□□□□ 0.9
SIPA1Q96FS4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 KRT17P3-201ENST00000420566 1262 ntBASIC20.68■□□□□ 0.9
SIPA1Q96FS4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.68■□□□□ 0.9
SIPA1Q96FS4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIPA1Q96FS4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIPA1Q96FS4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
SIPA1Q96FS4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SIPA1Q96FS4 RPS2P4-201ENST00000476944 856 ntBASIC20.67■□□□□ 0.9
SIPA1Q96FS4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.67■□□□□ 0.9
SIPA1Q96FS4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIPA1Q96FS4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.67■□□□□ 0.9
SIPA1Q96FS4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIPA1Q96FS4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIPA1Q96FS4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIPA1Q96FS4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms