Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.19■□□□□ 0.98
HDAC11Q96DB2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.19■□□□□ 0.98
HDAC11Q96DB2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.19■□□□□ 0.98
HDAC11Q96DB2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC11Q96DB2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.19■□□□□ 0.98
HDAC11Q96DB2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.19■□□□□ 0.98
HDAC11Q96DB2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC11Q96DB2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.19■□□□□ 0.98
HDAC11Q96DB2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC11Q96DB2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC11Q96DB2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC11Q96DB2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC11Q96DB2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 AL162430.1-201ENST00000480705 870 ntBASIC21.18■□□□□ 0.98
HDAC11Q96DB2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC11Q96DB2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.17■□□□□ 0.98
HDAC11Q96DB2 KRT18P11-201ENST00000435214 1283 ntBASIC21.17■□□□□ 0.98
HDAC11Q96DB2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.17■□□□□ 0.98
HDAC11Q96DB2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 AC091799.1-201ENST00000422823 811 ntBASIC21.16■□□□□ 0.98
HDAC11Q96DB2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 AC137761.2-201ENST00000561729 223 ntBASIC21.16■□□□□ 0.98
HDAC11Q96DB2 AC145350.3-201ENST00000569033 163 ntBASIC21.16■□□□□ 0.98
HDAC11Q96DB2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HDAC11Q96DB2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.15■□□□□ 0.98
HDAC11Q96DB2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms