Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN23Q96B33 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN23Q96B33 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.81■□□□□ 0.92
CLDN23Q96B33 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN23Q96B33 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN23Q96B33 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.81■□□□□ 0.92
CLDN23Q96B33 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN23Q96B33 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.8■□□□□ 0.92
CLDN23Q96B33 AC087633.2-202ENST00000565166 1439 ntBASIC20.8■□□□□ 0.92
CLDN23Q96B33 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.8■□□□□ 0.92
CLDN23Q96B33 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN23Q96B33 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN23Q96B33 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN23Q96B33 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CLDN23Q96B33 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN23Q96B33 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.8■□□□□ 0.92
CLDN23Q96B33 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN23Q96B33 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.8■□□□□ 0.92
CLDN23Q96B33 AL445228.2-201ENST00000605589 952 ntBASIC20.8■□□□□ 0.92
CLDN23Q96B33 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN23Q96B33 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.8■□□□□ 0.92
CLDN23Q96B33 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.8■□□□□ 0.92
CLDN23Q96B33 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN23Q96B33 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN23Q96B33 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN23Q96B33 AC026471.6-201ENST00000622954 1905 ntBASIC20.8■□□□□ 0.92
CLDN23Q96B33 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN23Q96B33 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLDN23Q96B33 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN23Q96B33 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CLDN23Q96B33 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN23Q96B33 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN23Q96B33 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN23Q96B33 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN23Q96B33 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN23Q96B33 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.79■□□□□ 0.92
CLDN23Q96B33 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CLDN23Q96B33 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CLDN23Q96B33 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN23Q96B33 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.79■□□□□ 0.92
CLDN23Q96B33 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN23Q96B33 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
CLDN23Q96B33 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.79■□□□□ 0.92
CLDN23Q96B33 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CLDN23Q96B33 CD177P1-201ENST00000606252 935 ntBASIC20.79■□□□□ 0.92
CLDN23Q96B33 AL353708.3-201ENST00000610272 989 ntBASIC20.79■□□□□ 0.92
CLDN23Q96B33 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN23Q96B33 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN23Q96B33 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN23Q96B33 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN23Q96B33 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN23Q96B33 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN23Q96B33 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN23Q96B33 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN23Q96B33 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN23Q96B33 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN23Q96B33 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.78■□□□□ 0.92
CLDN23Q96B33 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.78■□□□□ 0.92
CLDN23Q96B33 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.78■□□□□ 0.92
CLDN23Q96B33 AC006557.6-201ENST00000623071 864 ntBASIC20.78■□□□□ 0.92
CLDN23Q96B33 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.78■□□□□ 0.92
CLDN23Q96B33 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN23Q96B33 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN23Q96B33 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN23Q96B33 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN23Q96B33 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN23Q96B33 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CLDN23Q96B33 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN23Q96B33 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.77■□□□□ 0.92
CLDN23Q96B33 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CLDN23Q96B33 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.77■□□□□ 0.92
CLDN23Q96B33 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN23Q96B33 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN23Q96B33 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN23Q96B33 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CLDN23Q96B33 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN23Q96B33 AC010542.4-201ENST00000563151 1910 ntBASIC20.76■□□□□ 0.91
CLDN23Q96B33 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN23Q96B33 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN23Q96B33 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CLDN23Q96B33 TMPOP1-202ENST00000424642 1267 ntBASIC20.76■□□□□ 0.91
CLDN23Q96B33 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN23Q96B33 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CLDN23Q96B33 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN23Q96B33 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.76■□□□□ 0.91
CLDN23Q96B33 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN23Q96B33 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.76■□□□□ 0.91
CLDN23Q96B33 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.76■□□□□ 0.91
CLDN23Q96B33 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN23Q96B33 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN23Q96B33 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN23Q96B33 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN23Q96B33 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN23Q96B33 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
CLDN23Q96B33 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN23Q96B33 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN23Q96B33 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN23Q96B33 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN23Q96B33 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN23Q96B33 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms