Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 RAP2CP1-201ENST00000605103 478 ntBASIC23.53■■□□□ 1.36
TNFRSF25Q93038 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TNFRSF25Q93038 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TNFRSF25Q93038 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TNFRSF25Q93038 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TNFRSF25Q93038 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TNFRSF25Q93038 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 AL137784.2-201ENST00000607332 1000 ntBASIC23.52■■□□□ 1.36
TNFRSF25Q93038 FAM21FP-204ENST00000608637 956 ntBASIC23.52■■□□□ 1.36
TNFRSF25Q93038 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.52■■□□□ 1.36
TNFRSF25Q93038 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
TNFRSF25Q93038 AL121603.2-201ENST00000557373 2117 ntBASIC23.51■■□□□ 1.35
TNFRSF25Q93038 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF25Q93038 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF25Q93038 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF25Q93038 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF25Q93038 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF25Q93038 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.51■■□□□ 1.35
TNFRSF25Q93038 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.51■■□□□ 1.35
TNFRSF25Q93038 CDCA4P2-201ENST00000441182 718 ntBASIC23.51■■□□□ 1.35
TNFRSF25Q93038 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF25Q93038 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.51■■□□□ 1.35
TNFRSF25Q93038 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.51■■□□□ 1.35
TNFRSF25Q93038 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.51■■□□□ 1.35
TNFRSF25Q93038 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF25Q93038 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF25Q93038 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
TNFRSF25Q93038 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF25Q93038 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.5■■□□□ 1.35
TNFRSF25Q93038 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF25Q93038 AL157384.1-201ENST00000445995 2473 ntBASIC23.5■■□□□ 1.35
TNFRSF25Q93038 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF25Q93038 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.5■■□□□ 1.35
TNFRSF25Q93038 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.5■■□□□ 1.35
TNFRSF25Q93038 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
TNFRSF25Q93038 AC080038.1-201ENST00000611274 1154 ntBASIC23.5■■□□□ 1.35
TNFRSF25Q93038 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.5■■□□□ 1.35
TNFRSF25Q93038 AC073111.5-205ENST00000641717 521 ntBASIC23.5■■□□□ 1.35
TNFRSF25Q93038 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF25Q93038 FEM1AP1-201ENST00000431297 1995 ntBASIC23.5■■□□□ 1.35
TNFRSF25Q93038 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
TNFRSF25Q93038 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF25Q93038 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
TNFRSF25Q93038 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 CDV3P1-201ENST00000471403 739 ntBASIC23.48■■□□□ 1.35
TNFRSF25Q93038 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 AC231657.2-201ENST00000624556 255 ntBASIC23.48■■□□□ 1.35
TNFRSF25Q93038 MIR2861-201ENST00000636310 90 ntBASIC23.48■■□□□ 1.35
TNFRSF25Q93038 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
TNFRSF25Q93038 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TNFRSF25Q93038 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TNFRSF25Q93038 FP700111.2-201ENST00000619190 1892 ntBASIC23.47■■□□□ 1.35
TNFRSF25Q93038 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TNFRSF25Q93038 AC073314.1-201ENST00000568729 2216 ntBASIC23.47■■□□□ 1.35
TNFRSF25Q93038 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TNFRSF25Q93038 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.47■■□□□ 1.35
TNFRSF25Q93038 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms