Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB3Q92617 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB3Q92617 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB3Q92617 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB3Q92617 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB3Q92617 AC053503.5-201ENST00000601508 636 ntBASIC16.25■□□□□ 0.19
NPIPB3Q92617 AL355001.2-201ENST00000620617 1191 ntBASIC16.25■□□□□ 0.19
NPIPB3Q92617 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.25■□□□□ 0.19
NPIPB3Q92617 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.25■□□□□ 0.19
NPIPB3Q92617 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB3Q92617 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB3Q92617 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.25■□□□□ 0.19
NPIPB3Q92617 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPB3Q92617 RASA4CP-201ENST00000424092 1398 ntBASIC16.25■□□□□ 0.19
NPIPB3Q92617 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB3Q92617 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
NPIPB3Q92617 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB3Q92617 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NPIPB3Q92617 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NPIPB3Q92617 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NPIPB3Q92617 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB3Q92617 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.24■□□□□ 0.19
NPIPB3Q92617 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.24■□□□□ 0.19
NPIPB3Q92617 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB3Q92617 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB3Q92617 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB3Q92617 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NPIPB3Q92617 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB3Q92617 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB3Q92617 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB3Q92617 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB3Q92617 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB3Q92617 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB3Q92617 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.24■□□□□ 0.19
NPIPB3Q92617 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.24■□□□□ 0.19
NPIPB3Q92617 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
NPIPB3Q92617 AP004607.4-201ENST00000530158 1459 ntBASIC16.23■□□□□ 0.19
NPIPB3Q92617 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.23■□□□□ 0.19
NPIPB3Q92617 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.23■□□□□ 0.19
NPIPB3Q92617 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.23■□□□□ 0.19
NPIPB3Q92617 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.23■□□□□ 0.19
NPIPB3Q92617 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.23■□□□□ 0.19
NPIPB3Q92617 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB3Q92617 AC061975.6-201ENST00000579045 1553 ntBASIC16.23■□□□□ 0.19
NPIPB3Q92617 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB3Q92617 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.23■□□□□ 0.19
NPIPB3Q92617 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.23■□□□□ 0.19
NPIPB3Q92617 AF213884.3-201ENST00000563833 479 ntBASIC16.23■□□□□ 0.19
NPIPB3Q92617 EEF1DP3-203ENST00000566025 782 ntBASIC16.23■□□□□ 0.19
NPIPB3Q92617 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.23■□□□□ 0.19
NPIPB3Q92617 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB3Q92617 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB3Q92617 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB3Q92617 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
NPIPB3Q92617 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPB3Q92617 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB3Q92617 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB3Q92617 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB3Q92617 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB3Q92617 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NPIPB3Q92617 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NPIPB3Q92617 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NPIPB3Q92617 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB3Q92617 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB3Q92617 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB3Q92617 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.22■□□□□ 0.19
NPIPB3Q92617 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPB3Q92617 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPB3Q92617 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.22■□□□□ 0.19
NPIPB3Q92617 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB3Q92617 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPB3Q92617 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPB3Q92617 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NPIPB3Q92617 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB3Q92617 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB3Q92617 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NPIPB3Q92617 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.22■□□□□ 0.19
NPIPB3Q92617 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NPIPB3Q92617 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB3Q92617 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
NPIPB3Q92617 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPB3Q92617 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPB3Q92617 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPB3Q92617 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.21■□□□□ 0.19
NPIPB3Q92617 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
NPIPB3Q92617 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPB3Q92617 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPB3Q92617 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.21■□□□□ 0.19
NPIPB3Q92617 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPB3Q92617 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NPIPB3Q92617 AC011484.1-201ENST00000377652 1995 ntBASIC16.21■□□□□ 0.19
NPIPB3Q92617 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPB3Q92617 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPB3Q92617 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPB3Q92617 MIR939-201ENST00000401314 82 ntBASIC16.21■□□□□ 0.19
NPIPB3Q92617 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPB3Q92617 AC091305.1-201ENST00000479476 895 ntBASIC16.21■□□□□ 0.19
NPIPB3Q92617 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.21■□□□□ 0.19
NPIPB3Q92617 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPB3Q92617 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms