Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
SLC44A1Q8WWI5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC44A1Q8WWI5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC44A1Q8WWI5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SLC44A1Q8WWI5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC44A1Q8WWI5 AP001330.3-201ENST00000520123 633 ntBASIC20.66■□□□□ 0.9
SLC44A1Q8WWI5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC44A1Q8WWI5 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.66■□□□□ 0.9
SLC44A1Q8WWI5 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.66■□□□□ 0.9
SLC44A1Q8WWI5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC44A1Q8WWI5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC44A1Q8WWI5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC44A1Q8WWI5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC44A1Q8WWI5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC44A1Q8WWI5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC44A1Q8WWI5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC44A1Q8WWI5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC44A1Q8WWI5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.64■□□□□ 0.9
SLC44A1Q8WWI5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC44A1Q8WWI5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC44A1Q8WWI5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC44A1Q8WWI5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.64■□□□□ 0.9
SLC44A1Q8WWI5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC44A1Q8WWI5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC44A1Q8WWI5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
SLC44A1Q8WWI5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.64■□□□□ 0.89
SLC44A1Q8WWI5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.64■□□□□ 0.89
SLC44A1Q8WWI5 AC012414.1-201ENST00000556676 535 ntBASIC20.64■□□□□ 0.89
SLC44A1Q8WWI5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC44A1Q8WWI5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC44A1Q8WWI5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.64■□□□□ 0.89
SLC44A1Q8WWI5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC44A1Q8WWI5 AC092720.2-201ENST00000602388 1665 ntBASIC20.64■□□□□ 0.89
SLC44A1Q8WWI5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC44A1Q8WWI5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms