Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 AC092437.1-201ENST00000624794 1048 ntBASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.39■□□□□ 0.7
SIMC1Q8NDZ2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SIMC1Q8NDZ2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 MYCNOS-205ENST00000641950 531 ntBASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIMC1Q8NDZ2 AC007952.6-201ENST00000573168 2673 ntBASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 AC003957.1-201ENST00000625108 2673 ntBASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 AC011767.1-201ENST00000617410 1153 ntBASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIMC1Q8NDZ2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 AC006015.1-201ENST00000429970 570 ntBASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 AC120498.10-201ENST00000621827 505 ntBASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIMC1Q8NDZ2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIMC1Q8NDZ2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 RBM17P2-201ENST00000616397 1405 ntBASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.35■□□□□ 0.69
SIMC1Q8NDZ2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms