Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDRT4Q8N9R6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDRT4Q8N9R6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 AC016769.1-201ENST00000409132 1010 ntBASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 AL162430.1-201ENST00000480705 870 ntBASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 AC007225.1-201ENST00000566331 1836 ntBASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDRT4Q8N9R6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CDRT4Q8N9R6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDRT4Q8N9R6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDRT4Q8N9R6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.14■□□□□ 0.66
CDRT4Q8N9R6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDRT4Q8N9R6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 AC010536.3-201ENST00000620306 533 ntBASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.14■□□□□ 0.65
CDRT4Q8N9R6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 AC007322.3-201ENST00000426526 701 ntBASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 CDV3P1-201ENST00000471403 739 ntBASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 TERF1P5-201ENST00000477545 1207 ntBASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 AC027702.1-201ENST00000563810 1770 ntBASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDRT4Q8N9R6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT4Q8N9R6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.12■□□□□ 0.65
CDRT4Q8N9R6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CDRT4Q8N9R6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.12■□□□□ 0.65
CDRT4Q8N9R6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.12■□□□□ 0.65
CDRT4Q8N9R6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT4Q8N9R6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT4Q8N9R6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT4Q8N9R6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT4Q8N9R6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT4Q8N9R6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT4Q8N9R6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.12■□□□□ 0.65
CDRT4Q8N9R6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDRT4Q8N9R6 FEM1AP1-201ENST00000431297 1995 ntBASIC19.12■□□□□ 0.65
CDRT4Q8N9R6 FP700111.2-201ENST00000619190 1892 ntBASIC19.11■□□□□ 0.65
CDRT4Q8N9R6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDRT4Q8N9R6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CDRT4Q8N9R6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms