Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF39Q8N4T4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF39Q8N4T4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF39Q8N4T4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 SLC29A4P1-201ENST00000398760 971 ntBASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 AL355802.2-201ENST00000402069 882 ntBASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.52■□□□□ 0.72
ARHGEF39Q8N4T4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ARHGEF39Q8N4T4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.52■□□□□ 0.71
ARHGEF39Q8N4T4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
ARHGEF39Q8N4T4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
ARHGEF39Q8N4T4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 MCRIP2P1-201ENST00000394346 511 ntBASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 AL355472.2-201ENST00000422958 438 ntBASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 AC092118.2-201ENST00000613495 667 ntBASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF39Q8N4T4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 AC007375.3-201ENST00000600936 2314 ntBASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 KRT17P1-201ENST00000399211 1546 ntBASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.5■□□□□ 0.71
ARHGEF39Q8N4T4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 BX276092.2-201ENST00000417668 665 ntBASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 AC069152.1-201ENST00000438030 544 ntBASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.49■□□□□ 0.71
ARHGEF39Q8N4T4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.48■□□□□ 0.71
ARHGEF39Q8N4T4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms