Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.11■□□□□ 0.65
DEPDC4Q8N2C3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.11■□□□□ 0.65
DEPDC4Q8N2C3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.11■□□□□ 0.65
DEPDC4Q8N2C3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
DEPDC4Q8N2C3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.11■□□□□ 0.65
DEPDC4Q8N2C3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.11■□□□□ 0.65
DEPDC4Q8N2C3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DEPDC4Q8N2C3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DEPDC4Q8N2C3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 AP005435.1-201ENST00000529293 1178 ntBASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEPDC4Q8N2C3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 AP004607.7-201ENST00000527152 1677 ntBASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEPDC4Q8N2C3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.08■□□□□ 0.65
DEPDC4Q8N2C3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DEPDC4Q8N2C3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.08■□□□□ 0.65
DEPDC4Q8N2C3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.08■□□□□ 0.65
DEPDC4Q8N2C3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.08■□□□□ 0.65
DEPDC4Q8N2C3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
DEPDC4Q8N2C3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
DEPDC4Q8N2C3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.08■□□□□ 0.64
DEPDC4Q8N2C3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DEPDC4Q8N2C3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
DEPDC4Q8N2C3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.08■□□□□ 0.64
DEPDC4Q8N2C3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
DEPDC4Q8N2C3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.08■□□□□ 0.64
DEPDC4Q8N2C3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 MIR6821-201ENST00000617625 74 ntBASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 AL358852.1-201ENST00000623174 1268 ntBASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
DEPDC4Q8N2C3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 AC097381.1-201ENST00000429019 1296 ntBASIC19.06■□□□□ 0.64
DEPDC4Q8N2C3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms