Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 AC008175.2-201ENST00000612840 297 ntBASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 AC092720.2-201ENST00000602388 1665 ntBASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LINC01561Q8N1V8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LINC01561Q8N1V8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 UNC93B3-201ENST00000308076 687 ntBASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC01561Q8N1V8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 MIR572-201ENST00000384983 95 ntBASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01561Q8N1V8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01561Q8N1V8 AL512408.1-201ENST00000569378 2000 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms