Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 CROCCP5-201ENST00000436658 830 ntBASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 CDV3P1-201ENST00000471403 739 ntBASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 AC005181.1-201ENST00000604782 1256 ntBASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
SCUBE3Q8IX30 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 AC007322.3-201ENST00000426526 701 ntBASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 AL162412.1-201ENST00000567129 965 ntBASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCUBE3Q8IX30 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
SCUBE3Q8IX30 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCUBE3Q8IX30 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.67■■□□□ 1.06
SCUBE3Q8IX30 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCUBE3Q8IX30 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCUBE3Q8IX30 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SCUBE3Q8IX30 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCUBE3Q8IX30 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCUBE3Q8IX30 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCUBE3Q8IX30 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.67■■□□□ 1.06
SCUBE3Q8IX30 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SCUBE3Q8IX30 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.67■■□□□ 1.06
SCUBE3Q8IX30 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
SCUBE3Q8IX30 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 HLA-L-209ENST00000420110 1011 ntBASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 AL050303.2-201ENST00000619798 666 ntBASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 AC006128.1-201ENST00000624704 1661 ntBASIC21.66■■□□□ 1.06
SCUBE3Q8IX30 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 CYP2T1P-201ENST00000432607 1285 ntBASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms