Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM48Q8IWZ4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM48Q8IWZ4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.2■□□□□ 0.82
TRIM48Q8IWZ4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.2■□□□□ 0.82
TRIM48Q8IWZ4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
TRIM48Q8IWZ4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TRIM48Q8IWZ4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM48Q8IWZ4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM48Q8IWZ4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM48Q8IWZ4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
TRIM48Q8IWZ4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 MIR4758-201ENST00000577688 71 ntBASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 AC244015.2-201ENST00000616358 1861 ntBASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 SLC25A24-204ENST00000569674 2357 ntBASIC20.19■□□□□ 0.82
TRIM48Q8IWZ4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 BX276092.2-201ENST00000417668 665 ntBASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 AC007322.3-201ENST00000426526 701 ntBASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 FAM21FP-204ENST00000608637 956 ntBASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 AC133041.1-202ENST00000642053 222 ntBASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM48Q8IWZ4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 MIPEPP3-201ENST00000412105 444 ntBASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TRIM48Q8IWZ4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 AC069152.1-201ENST00000438030 544 ntBASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 AC010980.2-201ENST00000587099 1412 ntBASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM48Q8IWZ4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms