Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NUDCD3Q8IVD9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NUDCD3Q8IVD9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NUDCD3Q8IVD9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
NUDCD3Q8IVD9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NUDCD3Q8IVD9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NUDCD3Q8IVD9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 BX005040.4-201ENST00000637145 1518 ntBASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NUDCD3Q8IVD9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 RNF165-205ENST00000588679 2904 ntBASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NUDCD3Q8IVD9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.42■□□□□ 0.86
NUDCD3Q8IVD9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 AC011484.1-201ENST00000377652 1995 ntBASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 BX842568.3-201ENST00000418104 571 ntBASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUDCD3Q8IVD9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUDCD3Q8IVD9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUDCD3Q8IVD9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.4■□□□□ 0.86
NUDCD3Q8IVD9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NUDCD3Q8IVD9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUDCD3Q8IVD9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.4■□□□□ 0.86
NUDCD3Q8IVD9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NUDCD3Q8IVD9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NUDCD3Q8IVD9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NUDCD3Q8IVD9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUDCD3Q8IVD9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NUDCD3Q8IVD9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NUDCD3Q8IVD9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NUDCD3Q8IVD9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
NUDCD3Q8IVD9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NUDCD3Q8IVD9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms