Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 AC243732.1-201ENST00000612648 864 ntBASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13BQ7Z7G8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
VPS13BQ7Z7G8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
VPS13BQ7Z7G8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
VPS13BQ7Z7G8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 RARRES2P10-201ENST00000564312 460 ntBASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 AL589743.5-201ENST00000616611 1050 ntBASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13BQ7Z7G8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 AL135905.2-201ENST00000584934 1404 ntBASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 AC120498.10-201ENST00000621827 505 ntBASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 AC124016.1-201ENST00000609552 612 ntBASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
VPS13BQ7Z7G8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 KRT17P2-201ENST00000300992 1314 ntBASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 233.3 ms