Protein–RNA interactions for Protein: Q7Z614

SNX20, Sorting nexin-20, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20Q7Z614 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX20Q7Z614 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
SNX20Q7Z614 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.49■□□□□ 0.87
SNX20Q7Z614 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 AL162412.1-201ENST00000567129 965 ntBASIC20.49■□□□□ 0.87
SNX20Q7Z614 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SNX20Q7Z614 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SNX20Q7Z614 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNX20Q7Z614 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SNX20Q7Z614 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX20Q7Z614 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX20Q7Z614 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNX20Q7Z614 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX20Q7Z614 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNX20Q7Z614 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNX20Q7Z614 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.48■□□□□ 0.87
SNX20Q7Z614 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNX20Q7Z614 AC080038.1-201ENST00000611274 1154 ntBASIC20.48■□□□□ 0.87
SNX20Q7Z614 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SNX20Q7Z614 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX20Q7Z614 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX20Q7Z614 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.48■□□□□ 0.87
SNX20Q7Z614 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.48■□□□□ 0.87
SNX20Q7Z614 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX20Q7Z614 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SNX20Q7Z614 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX20Q7Z614 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.47■□□□□ 0.87
SNX20Q7Z614 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX20Q7Z614 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SNX20Q7Z614 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX20Q7Z614 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.47■□□□□ 0.87
SNX20Q7Z614 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SNX20Q7Z614 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.47■□□□□ 0.87
SNX20Q7Z614 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX20Q7Z614 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX20Q7Z614 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.47■□□□□ 0.87
SNX20Q7Z614 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX20Q7Z614 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX20Q7Z614 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.47■□□□□ 0.87
SNX20Q7Z614 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNX20Q7Z614 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SNX20Q7Z614 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX20Q7Z614 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX20Q7Z614 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX20Q7Z614 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.46■□□□□ 0.87
SNX20Q7Z614 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.46■□□□□ 0.87
SNX20Q7Z614 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX20Q7Z614 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX20Q7Z614 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.46■□□□□ 0.87
SNX20Q7Z614 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNX20Q7Z614 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX20Q7Z614 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX20Q7Z614 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX20Q7Z614 AC007322.1-201ENST00000426983 750 ntBASIC20.46■□□□□ 0.87
SNX20Q7Z614 FAM21FP-204ENST00000608637 956 ntBASIC20.46■□□□□ 0.87
SNX20Q7Z614 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.46■□□□□ 0.87
SNX20Q7Z614 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX20Q7Z614 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
SNX20Q7Z614 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX20Q7Z614 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.46■□□□□ 0.87
SNX20Q7Z614 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX20Q7Z614 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX20Q7Z614 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNX20Q7Z614 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.46■□□□□ 0.87
SNX20Q7Z614 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
SNX20Q7Z614 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNX20Q7Z614 AC068338.2-201ENST00000563278 1430 ntBASIC20.45■□□□□ 0.86
SNX20Q7Z614 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX20Q7Z614 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX20Q7Z614 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SNX20Q7Z614 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.45■□□□□ 0.86
SNX20Q7Z614 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.45■□□□□ 0.86
SNX20Q7Z614 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SNX20Q7Z614 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNX20Q7Z614 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX20Q7Z614 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.45■□□□□ 0.86
SNX20Q7Z614 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.45■□□□□ 0.86
SNX20Q7Z614 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.45■□□□□ 0.86
SNX20Q7Z614 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.45■□□□□ 0.86
SNX20Q7Z614 AC092666.2-201ENST00000613287 246 ntBASIC20.45■□□□□ 0.86
SNX20Q7Z614 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SNX20Q7Z614 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX20Q7Z614 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SNX20Q7Z614 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.45■□□□□ 0.86
SNX20Q7Z614 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.45■□□□□ 0.86
SNX20Q7Z614 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SNX20Q7Z614 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms