Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHFQ7M4L6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHFQ7M4L6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.6■□□□□ 0.57
SHFQ7M4L6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHFQ7M4L6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHFQ7M4L6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHFQ7M4L6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.59■□□□□ 0.57
SHFQ7M4L6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.59■□□□□ 0.57
SHFQ7M4L6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SHFQ7M4L6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHFQ7M4L6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHFQ7M4L6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.59■□□□□ 0.57
SHFQ7M4L6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SHFQ7M4L6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.59■□□□□ 0.57
SHFQ7M4L6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.59■□□□□ 0.57
SHFQ7M4L6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHFQ7M4L6 AC008764.7-201ENST00000593779 1081 ntBASIC18.59■□□□□ 0.57
SHFQ7M4L6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHFQ7M4L6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SHFQ7M4L6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.59■□□□□ 0.57
SHFQ7M4L6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHFQ7M4L6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHFQ7M4L6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHFQ7M4L6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.59■□□□□ 0.57
SHFQ7M4L6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.59■□□□□ 0.57
SHFQ7M4L6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHFQ7M4L6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.58■□□□□ 0.57
SHFQ7M4L6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHFQ7M4L6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHFQ7M4L6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SHFQ7M4L6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SHFQ7M4L6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.58■□□□□ 0.57
SHFQ7M4L6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHFQ7M4L6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.58■□□□□ 0.56
SHFQ7M4L6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.58■□□□□ 0.56
SHFQ7M4L6 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.58■□□□□ 0.56
SHFQ7M4L6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SHFQ7M4L6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SHFQ7M4L6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.58■□□□□ 0.56
SHFQ7M4L6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SHFQ7M4L6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SHFQ7M4L6 AC027682.1-201ENST00000562846 899 ntBASIC18.58■□□□□ 0.56
SHFQ7M4L6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.58■□□□□ 0.56
SHFQ7M4L6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.58■□□□□ 0.56
SHFQ7M4L6 AC105233.4-201ENST00000642045 216 ntBASIC18.58■□□□□ 0.56
SHFQ7M4L6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SHFQ7M4L6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHFQ7M4L6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHFQ7M4L6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHFQ7M4L6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SHFQ7M4L6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.58■□□□□ 0.56
SHFQ7M4L6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHFQ7M4L6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHFQ7M4L6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHFQ7M4L6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.58■□□□□ 0.56
SHFQ7M4L6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHFQ7M4L6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHFQ7M4L6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHFQ7M4L6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SHFQ7M4L6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHFQ7M4L6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
SHFQ7M4L6 AC008406.3-201ENST00000620001 1374 ntBASIC18.57■□□□□ 0.56
SHFQ7M4L6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHFQ7M4L6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHFQ7M4L6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHFQ7M4L6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHFQ7M4L6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.57■□□□□ 0.56
SHFQ7M4L6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
SHFQ7M4L6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SHFQ7M4L6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.57■□□□□ 0.56
SHFQ7M4L6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHFQ7M4L6 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.57■□□□□ 0.56
SHFQ7M4L6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.57■□□□□ 0.56
SHFQ7M4L6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.57■□□□□ 0.56
SHFQ7M4L6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHFQ7M4L6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.57■□□□□ 0.56
SHFQ7M4L6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHFQ7M4L6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.56■□□□□ 0.56
SHFQ7M4L6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.56■□□□□ 0.56
SHFQ7M4L6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHFQ7M4L6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SHFQ7M4L6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHFQ7M4L6 AC099791.1-201ENST00000416440 715 ntBASIC18.56■□□□□ 0.56
SHFQ7M4L6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHFQ7M4L6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.56■□□□□ 0.56
SHFQ7M4L6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.56■□□□□ 0.56
SHFQ7M4L6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHFQ7M4L6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHFQ7M4L6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHFQ7M4L6 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.56■□□□□ 0.56
SHFQ7M4L6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHFQ7M4L6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHFQ7M4L6 AC055733.4-201ENST00000638462 1354 ntBASIC18.55■□□□□ 0.56
SHFQ7M4L6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SHFQ7M4L6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.55■□□□□ 0.56
SHFQ7M4L6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SHFQ7M4L6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHFQ7M4L6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHFQ7M4L6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHFQ7M4L6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms