Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 AC013268.1-206ENST00000638368 961 ntBASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 AC112229.1-201ENST00000639295 961 ntBASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 MIR935-201ENST00000401179 91 ntBASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 CDV3P1-201ENST00000471403 739 ntBASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 DUX4L16-201ENST00000555130 1264 ntBASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 AC022517.1-201ENST00000592429 346 ntBASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 AL591742.1-201ENST00000604433 565 ntBASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
COLCA1Q6ZS62 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.77■□□□□ 0.43
COLCA1Q6ZS62 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COLCA1Q6ZS62 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.76■□□□□ 0.43
COLCA1Q6ZS62 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COLCA1Q6ZS62 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
COLCA1Q6ZS62 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.76■□□□□ 0.43
COLCA1Q6ZS62 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COLCA1Q6ZS62 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
COLCA1Q6ZS62 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COLCA1Q6ZS62 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COLCA1Q6ZS62 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COLCA1Q6ZS62 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.76■□□□□ 0.43
COLCA1Q6ZS62 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.76■□□□□ 0.43
COLCA1Q6ZS62 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
COLCA1Q6ZS62 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
COLCA1Q6ZS62 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COLCA1Q6ZS62 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 FAM21FP-204ENST00000608637 956 ntBASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 AC011767.1-201ENST00000617410 1153 ntBASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 FP700111.2-201ENST00000619190 1892 ntBASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COLCA1Q6ZS62 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 AP005212.1-201ENST00000581547 1997 ntBASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 CNN2P6-201ENST00000439038 900 ntBASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 MIR2861-201ENST00000636310 90 ntBASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms