Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 AC027702.1-201ENST00000563810 1770 ntBASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 AC123595.1-201ENST00000440769 1046 ntBASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF111Q6ZNA4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF111Q6ZNA4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF111Q6ZNA4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF111Q6ZNA4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF111Q6ZNA4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF111Q6ZNA4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF111Q6ZNA4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF111Q6ZNA4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RNF111Q6ZNA4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF111Q6ZNA4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF111Q6ZNA4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF111Q6ZNA4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 LINC02228-203ENST00000641970 1355 ntBASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 PKD1P6-201ENST00000343738 4769 ntBASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 TPRG1LP1-201ENST00000598702 760 ntBASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RNF111Q6ZNA4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 MIR935-201ENST00000401179 91 ntBASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 RARRES2P6-201ENST00000567333 442 ntBASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF111Q6ZNA4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 AC005224.4-201ENST00000583262 1652 ntBASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RNF111Q6ZNA4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms