Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 AC034268.1-201ENST00000441047 882 ntBASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN4Q6PJG9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN4Q6PJG9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN4Q6PJG9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LRFN4Q6PJG9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LRFN4Q6PJG9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN4Q6PJG9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN4Q6PJG9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN4Q6PJG9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN4Q6PJG9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LRFN4Q6PJG9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN4Q6PJG9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN4Q6PJG9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.49■□□□□ 0.55
LRFN4Q6PJG9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN4Q6PJG9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN4Q6PJG9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN4Q6PJG9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 NTF6G-201ENST00000591094 616 ntBASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN4Q6PJG9 AC007952.6-201ENST00000573168 2673 ntBASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 AC003957.1-201ENST00000625108 2673 ntBASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 SLC7A5P2-201ENST00000553010 536 ntBASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 RARRES2P6-201ENST00000567333 442 ntBASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN4Q6PJG9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LRFN4Q6PJG9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
LRFN4Q6PJG9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.46■□□□□ 0.54
LRFN4Q6PJG9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.45■□□□□ 0.54
LRFN4Q6PJG9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRFN4Q6PJG9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms