Protein–RNA interactions for Protein: Q5VVW2

GARNL3, GTPase-activating Rap/Ran-GAP domain-like protein 3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3Q5VVW2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 AL137060.1-201ENST00000618151 2648 ntBASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
GARNL3Q5VVW2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.64■□□□□ 0.74
GARNL3Q5VVW2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.64■□□□□ 0.74
GARNL3Q5VVW2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
GARNL3Q5VVW2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
GARNL3Q5VVW2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
GARNL3Q5VVW2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GARNL3Q5VVW2 SLC29A4P1-201ENST00000398760 971 ntBASIC19.64■□□□□ 0.73
GARNL3Q5VVW2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GARNL3Q5VVW2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GARNL3Q5VVW2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GARNL3Q5VVW2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.64■□□□□ 0.73
GARNL3Q5VVW2 AC100791.3-201ENST00000617619 330 ntBASIC19.64■□□□□ 0.73
GARNL3Q5VVW2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.64■□□□□ 0.73
GARNL3Q5VVW2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GARNL3Q5VVW2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.64■□□□□ 0.73
GARNL3Q5VVW2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GARNL3Q5VVW2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
GARNL3Q5VVW2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 AC026310.3-201ENST00000625186 2373 ntBASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GARNL3Q5VVW2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.62■□□□□ 0.73
GARNL3Q5VVW2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GARNL3Q5VVW2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.62■□□□□ 0.73
GARNL3Q5VVW2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.62■□□□□ 0.73
GARNL3Q5VVW2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
GARNL3Q5VVW2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GARNL3Q5VVW2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.62■□□□□ 0.73
GARNL3Q5VVW2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
GARNL3Q5VVW2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GARNL3Q5VVW2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GARNL3Q5VVW2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.62■□□□□ 0.73
GARNL3Q5VVW2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 MKRN4P-201ENST00000444706 1521 ntBASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 GUSBP6-202ENST00000438529 1198 ntBASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
GARNL3Q5VVW2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GARNL3Q5VVW2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GARNL3Q5VVW2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GARNL3Q5VVW2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GARNL3Q5VVW2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.59■□□□□ 0.73
GARNL3Q5VVW2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GARNL3Q5VVW2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
GARNL3Q5VVW2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GARNL3Q5VVW2 AC093787.1-201ENST00000450396 207 ntBASIC19.59■□□□□ 0.73
GARNL3Q5VVW2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.59■□□□□ 0.73
GARNL3Q5VVW2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.59■□□□□ 0.73
GARNL3Q5VVW2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms