Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39BQ5VTQ0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TTC39BQ5VTQ0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.03
TTC39BQ5VTQ0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39BQ5VTQ0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39BQ5VTQ0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
TTC39BQ5VTQ0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39BQ5VTQ0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39BQ5VTQ0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TTC39BQ5VTQ0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39BQ5VTQ0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39BQ5VTQ0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39BQ5VTQ0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39BQ5VTQ0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.45■■□□□ 1.02
TTC39BQ5VTQ0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39BQ5VTQ0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TTC39BQ5VTQ0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39BQ5VTQ0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39BQ5VTQ0 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.44■■□□□ 1.02
TTC39BQ5VTQ0 AL591742.1-201ENST00000604433 565 ntBASIC21.44■■□□□ 1.02
TTC39BQ5VTQ0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.44■■□□□ 1.02
TTC39BQ5VTQ0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
TTC39BQ5VTQ0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39BQ5VTQ0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39BQ5VTQ0 AC068338.2-201ENST00000563278 1430 ntBASIC21.44■■□□□ 1.02
TTC39BQ5VTQ0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TTC39BQ5VTQ0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.44■■□□□ 1.02
TTC39BQ5VTQ0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39BQ5VTQ0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39BQ5VTQ0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39BQ5VTQ0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TTC39BQ5VTQ0 AC073130.3-201ENST00000624389 2278 ntBASIC21.43■■□□□ 1.02
TTC39BQ5VTQ0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39BQ5VTQ0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39BQ5VTQ0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.43■■□□□ 1.02
TTC39BQ5VTQ0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.43■■□□□ 1.02
TTC39BQ5VTQ0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39BQ5VTQ0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39BQ5VTQ0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39BQ5VTQ0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39BQ5VTQ0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39BQ5VTQ0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 CYP2T1P-201ENST00000432607 1285 ntBASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 NCF1B-203ENST00000435988 1254 ntBASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39BQ5VTQ0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 ID1-201ENST00000376105 1233 ntBASIC21.41■■□□□ 1.02
TTC39BQ5VTQ0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms