Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRIF1Q5T3J3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRIF1Q5T3J3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRIF1Q5T3J3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.46■□□□□ 0.71
LRIF1Q5T3J3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LRIF1Q5T3J3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LRIF1Q5T3J3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRIF1Q5T3J3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LRIF1Q5T3J3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.46■□□□□ 0.71
LRIF1Q5T3J3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.46■□□□□ 0.71
LRIF1Q5T3J3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 AL031432.3-201ENST00000607698 485 ntBASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
LRIF1Q5T3J3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 AFG3L1P-217ENST00000557444 2447 ntBASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 AL354811.1-201ENST00000610286 706 ntBASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 AC008175.2-201ENST00000612840 297 ntBASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 AL136967.2-201ENST00000623968 743 ntBASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 RARRES2P11-201ENST00000635158 484 ntBASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 AC008406.3-201ENST00000620001 1374 ntBASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRIF1Q5T3J3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRIF1Q5T3J3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LRIF1Q5T3J3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRIF1Q5T3J3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIF1Q5T3J3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.42■□□□□ 0.7
LRIF1Q5T3J3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIF1Q5T3J3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.42■□□□□ 0.7
LRIF1Q5T3J3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
LRIF1Q5T3J3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.42■□□□□ 0.7
LRIF1Q5T3J3 AC110285.6-201ENST00000617652 491 ntBASIC19.42■□□□□ 0.7
LRIF1Q5T3J3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIF1Q5T3J3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
LRIF1Q5T3J3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.42■□□□□ 0.7
LRIF1Q5T3J3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIF1Q5T3J3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 AC112907.3-201ENST00000577781 2400 ntBASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 AC092720.2-201ENST00000602388 1665 ntBASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIF1Q5T3J3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms