Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC34.14■■■■□ 3.06
SNAPC4Q5SXM2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
SNAPC4Q5SXM2 AC005521.1-201ENST00000393351 872 ntBASIC34.14■■■■□ 3.06
SNAPC4Q5SXM2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
SNAPC4Q5SXM2 AC006557.6-201ENST00000623071 864 ntBASIC34.14■■■■□ 3.06
SNAPC4Q5SXM2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
SNAPC4Q5SXM2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC34.13■■■■□ 3.05
SNAPC4Q5SXM2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC34.13■■■■□ 3.05
SNAPC4Q5SXM2 AC087633.2-202ENST00000565166 1439 ntBASIC34.13■■■■□ 3.05
SNAPC4Q5SXM2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
SNAPC4Q5SXM2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC34.13■■■■□ 3.05
SNAPC4Q5SXM2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC34.13■■■■□ 3.05
SNAPC4Q5SXM2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
SNAPC4Q5SXM2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC34.13■■■■□ 3.05
SNAPC4Q5SXM2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC34.13■■■■□ 3.05
SNAPC4Q5SXM2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
SNAPC4Q5SXM2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
SNAPC4Q5SXM2 AC113347.1-201ENST00000413321 391 ntBASIC34.12■■■■□ 3.05
SNAPC4Q5SXM2 SAPCD2P4-201ENST00000424595 1171 ntBASIC34.12■■■■□ 3.05
SNAPC4Q5SXM2 KRT18P57-201ENST00000443599 1254 ntBASIC34.12■■■■□ 3.05
SNAPC4Q5SXM2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC34.12■■■■□ 3.05
SNAPC4Q5SXM2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC34.12■■■■□ 3.05
SNAPC4Q5SXM2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC34.12■■■■□ 3.05
SNAPC4Q5SXM2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC34.12■■■■□ 3.05
SNAPC4Q5SXM2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
SNAPC4Q5SXM2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
SNAPC4Q5SXM2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
SNAPC4Q5SXM2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC34.11■■■■□ 3.05
SNAPC4Q5SXM2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC34.11■■■■□ 3.05
SNAPC4Q5SXM2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
SNAPC4Q5SXM2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
SNAPC4Q5SXM2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
SNAPC4Q5SXM2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC34.1■■■■□ 3.05
SNAPC4Q5SXM2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC34.1■■■■□ 3.05
SNAPC4Q5SXM2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
SNAPC4Q5SXM2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC34.1■■■■□ 3.05
SNAPC4Q5SXM2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC34.1■■■■□ 3.05
SNAPC4Q5SXM2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC34.1■■■■□ 3.05
SNAPC4Q5SXM2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC34.09■■■■□ 3.05
SNAPC4Q5SXM2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
SNAPC4Q5SXM2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
SNAPC4Q5SXM2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC34.09■■■■□ 3.05
SNAPC4Q5SXM2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC34.09■■■■□ 3.05
SNAPC4Q5SXM2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC34.09■■■■□ 3.05
SNAPC4Q5SXM2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
SNAPC4Q5SXM2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC34.09■■■■□ 3.05
SNAPC4Q5SXM2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
SNAPC4Q5SXM2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC34.08■■■■□ 3.05
SNAPC4Q5SXM2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC34.08■■■■□ 3.05
SNAPC4Q5SXM2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC34.08■■■■□ 3.05
SNAPC4Q5SXM2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
SNAPC4Q5SXM2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC34.08■■■■□ 3.05
SNAPC4Q5SXM2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC34.08■■■■□ 3.05
SNAPC4Q5SXM2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC34.08■■■■□ 3.05
SNAPC4Q5SXM2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC34.08■■■■□ 3.05
SNAPC4Q5SXM2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
SNAPC4Q5SXM2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC34.08■■■■□ 3.05
SNAPC4Q5SXM2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC34.07■■■■□ 3.05
SNAPC4Q5SXM2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC34.07■■■■□ 3.05
SNAPC4Q5SXM2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC34.07■■■■□ 3.05
SNAPC4Q5SXM2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC34.07■■■■□ 3.05
SNAPC4Q5SXM2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC34.07■■■■□ 3.05
SNAPC4Q5SXM2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC34.07■■■■□ 3.04
SNAPC4Q5SXM2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
SNAPC4Q5SXM2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC34.07■■■■□ 3.04
SNAPC4Q5SXM2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC34.07■■■■□ 3.04
SNAPC4Q5SXM2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
SNAPC4Q5SXM2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC34.07■■■■□ 3.04
SNAPC4Q5SXM2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC34.07■■■■□ 3.04
SNAPC4Q5SXM2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC34.07■■■■□ 3.04
SNAPC4Q5SXM2 AF186192.3-201ENST00000583427 947 ntBASIC34.07■■■■□ 3.04
SNAPC4Q5SXM2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC34.06■■■■□ 3.04
SNAPC4Q5SXM2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
SNAPC4Q5SXM2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC34.06■■■■□ 3.04
SNAPC4Q5SXM2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
SNAPC4Q5SXM2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC34.06■■■■□ 3.04
SNAPC4Q5SXM2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC34.06■■■■□ 3.04
SNAPC4Q5SXM2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC34.06■■■■□ 3.04
SNAPC4Q5SXM2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
SNAPC4Q5SXM2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
SNAPC4Q5SXM2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC34.05■■■■□ 3.04
SNAPC4Q5SXM2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC34.05■■■■□ 3.04
SNAPC4Q5SXM2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC34.05■■■■□ 3.04
SNAPC4Q5SXM2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC34.05■■■■□ 3.04
SNAPC4Q5SXM2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
SNAPC4Q5SXM2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC34.05■■■■□ 3.04
SNAPC4Q5SXM2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC34.05■■■■□ 3.04
SNAPC4Q5SXM2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC34.05■■■■□ 3.04
SNAPC4Q5SXM2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC34.05■■■■□ 3.04
SNAPC4Q5SXM2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC34.05■■■■□ 3.04
SNAPC4Q5SXM2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC34.05■■■■□ 3.04
SNAPC4Q5SXM2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
SNAPC4Q5SXM2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
SNAPC4Q5SXM2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
SNAPC4Q5SXM2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
SNAPC4Q5SXM2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
SNAPC4Q5SXM2 RER1-204ENST00000378518 522 ntTSL 3 BASIC34.04■■■■□ 3.04
SNAPC4Q5SXM2 RBM17P1-201ENST00000453646 1190 ntBASIC34.04■■■■□ 3.04
SNAPC4Q5SXM2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC34.04■■■■□ 3.04
SNAPC4Q5SXM2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC34.04■■■■□ 3.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms