Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDCD4Q53EL6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDCD4Q53EL6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDCD4Q53EL6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PDCD4Q53EL6 MIR572-201ENST00000384983 95 ntBASIC19.78■□□□□ 0.76
PDCD4Q53EL6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.78■□□□□ 0.76
PDCD4Q53EL6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDCD4Q53EL6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDCD4Q53EL6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.78■□□□□ 0.76
PDCD4Q53EL6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.78■□□□□ 0.76
PDCD4Q53EL6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDCD4Q53EL6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PDCD4Q53EL6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDCD4Q53EL6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDCD4Q53EL6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDCD4Q53EL6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.77■□□□□ 0.76
PDCD4Q53EL6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDCD4Q53EL6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.77■□□□□ 0.76
PDCD4Q53EL6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDCD4Q53EL6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDCD4Q53EL6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDCD4Q53EL6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDCD4Q53EL6 AC061975.6-201ENST00000579045 1553 ntBASIC19.77■□□□□ 0.76
PDCD4Q53EL6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.77■□□□□ 0.76
PDCD4Q53EL6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
PDCD4Q53EL6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PDCD4Q53EL6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDCD4Q53EL6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.75■□□□□ 0.75
PDCD4Q53EL6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDCD4Q53EL6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.74■□□□□ 0.75
PDCD4Q53EL6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms