Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 KRT18P56-201ENST00000507275 550 ntBASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 WWOX-216ENST00000569818 525 ntBASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RSPO4Q2I0M5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RSPO4Q2I0M5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RSPO4Q2I0M5 KRT18P22-201ENST00000402024 1347 ntBASIC20.12■□□□□ 0.81
RSPO4Q2I0M5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RSPO4Q2I0M5 AC026396.1-201ENST00000419388 421 ntBASIC20.12■□□□□ 0.81
RSPO4Q2I0M5 RBM17P1-201ENST00000453646 1190 ntBASIC20.12■□□□□ 0.81
RSPO4Q2I0M5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.12■□□□□ 0.81
RSPO4Q2I0M5 AF186192.3-201ENST00000583427 947 ntBASIC20.12■□□□□ 0.81
RSPO4Q2I0M5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RSPO4Q2I0M5 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RSPO4Q2I0M5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RSPO4Q2I0M5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RSPO4Q2I0M5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RSPO4Q2I0M5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 FAM197Y1-201ENST00000421178 764 ntBASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 AC245052.3-201ENST00000450182 901 ntBASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 AP000525.1-201ENST00000608286 694 ntBASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 AC079598.2-202ENST00000546624 1451 ntBASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RSPO4Q2I0M5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 MIR1238-201ENST00000408483 83 ntBASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RSPO4Q2I0M5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 UNC93B2-201ENST00000285383 730 ntBASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 SLC25A3P1-201ENST00000443844 931 ntBASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 NAPSB-206ENST00000562112 1266 ntBASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 AC091076.1-201ENST00000610741 619 ntBASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RSPO4Q2I0M5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RSPO4Q2I0M5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RSPO4Q2I0M5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RSPO4Q2I0M5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.08■□□□□ 0.81
RSPO4Q2I0M5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RSPO4Q2I0M5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms