Protein–RNA interactions for Protein: Q15818

NPTX1, Neuronal pentraxin-1, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX1Q15818 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.23■□□□□ 0.67
NPTX1Q15818 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.23■□□□□ 0.67
NPTX1Q15818 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPTX1Q15818 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPTX1Q15818 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPTX1Q15818 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.23■□□□□ 0.67
NPTX1Q15818 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.23■□□□□ 0.67
NPTX1Q15818 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPTX1Q15818 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.23■□□□□ 0.67
NPTX1Q15818 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.23■□□□□ 0.67
NPTX1Q15818 AL136967.2-201ENST00000623968 743 ntBASIC19.23■□□□□ 0.67
NPTX1Q15818 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPTX1Q15818 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.23■□□□□ 0.67
NPTX1Q15818 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPTX1Q15818 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.23■□□□□ 0.67
NPTX1Q15818 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.23■□□□□ 0.67
NPTX1Q15818 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
NPTX1Q15818 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPTX1Q15818 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPTX1Q15818 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPTX1Q15818 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.23■□□□□ 0.67
NPTX1Q15818 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.22■□□□□ 0.67
NPTX1Q15818 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPTX1Q15818 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPTX1Q15818 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NPTX1Q15818 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NPTX1Q15818 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPTX1Q15818 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPTX1Q15818 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPTX1Q15818 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.22■□□□□ 0.67
NPTX1Q15818 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPTX1Q15818 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPTX1Q15818 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.22■□□□□ 0.67
NPTX1Q15818 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.22■□□□□ 0.67
NPTX1Q15818 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.22■□□□□ 0.67
NPTX1Q15818 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPTX1Q15818 AC091305.1-201ENST00000479476 895 ntBASIC19.22■□□□□ 0.67
NPTX1Q15818 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.22■□□□□ 0.67
NPTX1Q15818 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.22■□□□□ 0.67
NPTX1Q15818 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPTX1Q15818 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPTX1Q15818 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPTX1Q15818 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.22■□□□□ 0.67
NPTX1Q15818 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.22■□□□□ 0.67
NPTX1Q15818 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPTX1Q15818 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.21■□□□□ 0.67
NPTX1Q15818 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.21■□□□□ 0.67
NPTX1Q15818 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPTX1Q15818 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NPTX1Q15818 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPTX1Q15818 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPTX1Q15818 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.21■□□□□ 0.67
NPTX1Q15818 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPTX1Q15818 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPTX1Q15818 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NPTX1Q15818 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPTX1Q15818 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.21■□□□□ 0.67
NPTX1Q15818 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPTX1Q15818 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.21■□□□□ 0.67
NPTX1Q15818 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPTX1Q15818 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.21■□□□□ 0.67
NPTX1Q15818 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NPTX1Q15818 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPTX1Q15818 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPTX1Q15818 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPTX1Q15818 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NPTX1Q15818 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.21■□□□□ 0.67
NPTX1Q15818 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPTX1Q15818 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPTX1Q15818 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.21■□□□□ 0.67
NPTX1Q15818 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
NPTX1Q15818 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPTX1Q15818 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
NPTX1Q15818 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.2■□□□□ 0.66
NPTX1Q15818 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.2■□□□□ 0.66
NPTX1Q15818 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPTX1Q15818 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPTX1Q15818 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPTX1Q15818 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPTX1Q15818 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.2■□□□□ 0.66
NPTX1Q15818 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.2■□□□□ 0.66
NPTX1Q15818 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.2■□□□□ 0.66
NPTX1Q15818 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPTX1Q15818 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.2■□□□□ 0.66
NPTX1Q15818 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.2■□□□□ 0.66
NPTX1Q15818 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPTX1Q15818 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.2■□□□□ 0.66
NPTX1Q15818 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NPTX1Q15818 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NPTX1Q15818 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NPTX1Q15818 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPTX1Q15818 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPTX1Q15818 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPTX1Q15818 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPTX1Q15818 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPTX1Q15818 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.19■□□□□ 0.66
NPTX1Q15818 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPTX1Q15818 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPTX1Q15818 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NPTX1Q15818 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms