Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SF3A2Q15428 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SF3A2Q15428 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
SF3A2Q15428 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.45■□□□□ 0.87
SF3A2Q15428 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.45■□□□□ 0.87
SF3A2Q15428 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SF3A2Q15428 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SF3A2Q15428 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SF3A2Q15428 KRT18P35-201ENST00000510488 1269 ntBASIC20.45■□□□□ 0.86
SF3A2Q15428 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SF3A2Q15428 AC012306.2-201ENST00000609350 630 ntBASIC20.45■□□□□ 0.86
SF3A2Q15428 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SF3A2Q15428 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
SF3A2Q15428 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
SF3A2Q15428 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SF3A2Q15428 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.44■□□□□ 0.86
SF3A2Q15428 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SF3A2Q15428 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SF3A2Q15428 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SF3A2Q15428 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.44■□□□□ 0.86
SF3A2Q15428 TMPOP1-202ENST00000424642 1267 ntBASIC20.44■□□□□ 0.86
SF3A2Q15428 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SF3A2Q15428 AC245052.3-201ENST00000450182 901 ntBASIC20.44■□□□□ 0.86
SF3A2Q15428 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.44■□□□□ 0.86
SF3A2Q15428 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.44■□□□□ 0.86
SF3A2Q15428 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SF3A2Q15428 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.44■□□□□ 0.86
SF3A2Q15428 AP001412.1-201ENST00000608405 714 ntBASIC20.44■□□□□ 0.86
SF3A2Q15428 AC124016.1-201ENST00000609552 612 ntBASIC20.44■□□□□ 0.86
SF3A2Q15428 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SF3A2Q15428 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SF3A2Q15428 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SF3A2Q15428 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
SF3A2Q15428 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SF3A2Q15428 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SF3A2Q15428 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.44■□□□□ 0.86
SF3A2Q15428 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SF3A2Q15428 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SF3A2Q15428 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SF3A2Q15428 C9orf163-202ENST00000624034 2573 ntBASIC20.43■□□□□ 0.86
SF3A2Q15428 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SF3A2Q15428 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SF3A2Q15428 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SF3A2Q15428 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.43■□□□□ 0.86
SF3A2Q15428 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SF3A2Q15428 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.43■□□□□ 0.86
SF3A2Q15428 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SF3A2Q15428 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SF3A2Q15428 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.43■□□□□ 0.86
SF3A2Q15428 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SF3A2Q15428 AL355075.4-201ENST00000554988 638 ntBASIC20.43■□□□□ 0.86
SF3A2Q15428 MTDHP1-201ENST00000605323 784 ntBASIC20.43■□□□□ 0.86
SF3A2Q15428 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SF3A2Q15428 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SF3A2Q15428 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SF3A2Q15428 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.43■□□□□ 0.86
SF3A2Q15428 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.43■□□□□ 0.86
SF3A2Q15428 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SF3A2Q15428 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SF3A2Q15428 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SF3A2Q15428 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.42■□□□□ 0.86
SF3A2Q15428 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.42■□□□□ 0.86
SF3A2Q15428 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SF3A2Q15428 ARMC10P1-201ENST00000313754 855 ntBASIC20.42■□□□□ 0.86
SF3A2Q15428 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.42■□□□□ 0.86
SF3A2Q15428 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.42■□□□□ 0.86
SF3A2Q15428 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.42■□□□□ 0.86
SF3A2Q15428 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SF3A2Q15428 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SF3A2Q15428 AC113410.3-201ENST00000623366 203 ntBASIC20.42■□□□□ 0.86
SF3A2Q15428 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.42■□□□□ 0.86
SF3A2Q15428 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SF3A2Q15428 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SF3A2Q15428 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SF3A2Q15428 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SF3A2Q15428 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.42■□□□□ 0.86
SF3A2Q15428 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SF3A2Q15428 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SF3A2Q15428 AC137767.1-201ENST00000602918 1920 ntBASIC20.41■□□□□ 0.86
SF3A2Q15428 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SF3A2Q15428 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.41■□□□□ 0.86
SF3A2Q15428 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SF3A2Q15428 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SF3A2Q15428 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SF3A2Q15428 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.41■□□□□ 0.86
SF3A2Q15428 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SF3A2Q15428 RN7SL850P-201ENST00000579959 291 ntBASIC20.41■□□□□ 0.86
SF3A2Q15428 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.41■□□□□ 0.86
SF3A2Q15428 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SF3A2Q15428 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SF3A2Q15428 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SF3A2Q15428 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.41■□□□□ 0.86
SF3A2Q15428 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SF3A2Q15428 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SF3A2Q15428 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SF3A2Q15428 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SF3A2Q15428 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SF3A2Q15428 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SF3A2Q15428 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.4■□□□□ 0.86
SF3A2Q15428 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms