Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCR4P61073 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CXCR4P61073 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCR4P61073 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCR4P61073 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.77■□□□□ 0.6
CXCR4P61073 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.77■□□□□ 0.6
CXCR4P61073 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CXCR4P61073 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CXCR4P61073 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCR4P61073 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CXCR4P61073 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CXCR4P61073 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
CXCR4P61073 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CXCR4P61073 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CXCR4P61073 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.77■□□□□ 0.59
CXCR4P61073 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.77■□□□□ 0.59
CXCR4P61073 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CXCR4P61073 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCR4P61073 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.76■□□□□ 0.59
CXCR4P61073 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CXCR4P61073 SERBP1P1-201ENST00000396021 1160 ntBASIC18.76■□□□□ 0.59
CXCR4P61073 AL138724.1-201ENST00000606771 1088 ntBASIC18.76■□□□□ 0.59
CXCR4P61073 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCR4P61073 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.76■□□□□ 0.59
CXCR4P61073 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.76■□□□□ 0.59
CXCR4P61073 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCR4P61073 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CXCR4P61073 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCR4P61073 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCR4P61073 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCR4P61073 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CXCR4P61073 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CXCR4P61073 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CXCR4P61073 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CXCR4P61073 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CXCR4P61073 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.75■□□□□ 0.59
CXCR4P61073 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CXCR4P61073 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CXCR4P61073 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.75■□□□□ 0.59
CXCR4P61073 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.75■□□□□ 0.59
CXCR4P61073 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.75■□□□□ 0.59
CXCR4P61073 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CXCR4P61073 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CXCR4P61073 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.75■□□□□ 0.59
CXCR4P61073 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CXCR4P61073 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CXCR4P61073 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CXCR4P61073 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.75■□□□□ 0.59
CXCR4P61073 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CXCR4P61073 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXCR4P61073 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CXCR4P61073 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXCR4P61073 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CXCR4P61073 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.74■□□□□ 0.59
CXCR4P61073 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.74■□□□□ 0.59
CXCR4P61073 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.74■□□□□ 0.59
CXCR4P61073 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CXCR4P61073 DUX4L19-201ENST00000557448 1267 ntBASIC18.74■□□□□ 0.59
CXCR4P61073 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXCR4P61073 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CXCR4P61073 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CXCR4P61073 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXCR4P61073 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CXCR4P61073 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXCR4P61073 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXCR4P61073 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXCR4P61073 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXCR4P61073 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXCR4P61073 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CXCR4P61073 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXCR4P61073 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.73■□□□□ 0.59
CXCR4P61073 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXCR4P61073 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXCR4P61073 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CXCR4P61073 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CXCR4P61073 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXCR4P61073 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CXCR4P61073 TNXA-203ENST00000507684 2038 ntBASIC18.73■□□□□ 0.59
CXCR4P61073 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CXCR4P61073 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXCR4P61073 SLC47A1P1-202ENST00000449666 945 ntBASIC18.73■□□□□ 0.59
CXCR4P61073 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.73■□□□□ 0.59
CXCR4P61073 AP005435.1-201ENST00000529293 1178 ntBASIC18.73■□□□□ 0.59
CXCR4P61073 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.73■□□□□ 0.59
CXCR4P61073 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXCR4P61073 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.73■□□□□ 0.59
CXCR4P61073 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CXCR4P61073 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXCR4P61073 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CXCR4P61073 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.73■□□□□ 0.59
CXCR4P61073 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CXCR4P61073 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXCR4P61073 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CXCR4P61073 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.72■□□□□ 0.59
CXCR4P61073 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXCR4P61073 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.72■□□□□ 0.59
CXCR4P61073 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CXCR4P61073 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXCR4P61073 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CXCR4P61073 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms