Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DEFA3P59666 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
DEFA3P59666 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DEFA3P59666 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
DEFA3P59666 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DEFA3P59666 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
DEFA3P59666 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DEFA3P59666 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DEFA3P59666 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DEFA3P59666 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DEFA3P59666 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.13■□□□□ 0.49
DEFA3P59666 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
DEFA3P59666 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
DEFA3P59666 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DEFA3P59666 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DEFA3P59666 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.13■□□□□ 0.49
DEFA3P59666 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DEFA3P59666 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.13■□□□□ 0.49
DEFA3P59666 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
DEFA3P59666 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
DEFA3P59666 NEFHP1-201ENST00000412845 2629 ntBASIC18.13■□□□□ 0.49
DEFA3P59666 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
DEFA3P59666 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
DEFA3P59666 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DEFA3P59666 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
DEFA3P59666 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.12■□□□□ 0.49
DEFA3P59666 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DEFA3P59666 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DEFA3P59666 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
DEFA3P59666 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.12■□□□□ 0.49
DEFA3P59666 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
DEFA3P59666 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DEFA3P59666 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DEFA3P59666 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DEFA3P59666 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DEFA3P59666 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DEFA3P59666 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.12■□□□□ 0.49
DEFA3P59666 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
DEFA3P59666 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
DEFA3P59666 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
DEFA3P59666 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.12■□□□□ 0.49
DEFA3P59666 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DEFA3P59666 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DEFA3P59666 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DEFA3P59666 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DEFA3P59666 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
DEFA3P59666 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
DEFA3P59666 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DEFA3P59666 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
DEFA3P59666 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DEFA3P59666 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DEFA3P59666 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.11■□□□□ 0.49
DEFA3P59666 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
DEFA3P59666 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DEFA3P59666 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DEFA3P59666 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DEFA3P59666 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
DEFA3P59666 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DEFA3P59666 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
DEFA3P59666 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.11■□□□□ 0.49
DEFA3P59666 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
DEFA3P59666 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DEFA3P59666 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DEFA3P59666 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DEFA3P59666 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
DEFA3P59666 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DEFA3P59666 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DEFA3P59666 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DEFA3P59666 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DEFA3P59666 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.1■□□□□ 0.49
DEFA3P59666 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
DEFA3P59666 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
DEFA3P59666 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DEFA3P59666 DUX4L4-201ENST00000566884 1269 ntBASIC18.1■□□□□ 0.49
DEFA3P59666 AC087393.1-201ENST00000582896 145 ntBASIC18.1■□□□□ 0.49
DEFA3P59666 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DEFA3P59666 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DEFA3P59666 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.1■□□□□ 0.49
DEFA3P59666 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DEFA3P59666 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.1■□□□□ 0.49
DEFA3P59666 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DEFA3P59666 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DEFA3P59666 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DEFA3P59666 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.09■□□□□ 0.49
DEFA3P59666 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
DEFA3P59666 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DEFA3P59666 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DEFA3P59666 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DEFA3P59666 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DEFA3P59666 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
DEFA3P59666 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.09■□□□□ 0.49
DEFA3P59666 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DEFA3P59666 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.09■□□□□ 0.49
DEFA3P59666 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
DEFA3P59666 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DEFA3P59666 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DEFA3P59666 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
DEFA3P59666 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DEFA3P59666 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.08■□□□□ 0.49
DEFA3P59666 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms