Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SNX16P57768 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SNX16P57768 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
SNX16P57768 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX16P57768 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.76■■□□□ 1.07
SNX16P57768 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX16P57768 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX16P57768 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX16P57768 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.76■■□□□ 1.07
SNX16P57768 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.76■■□□□ 1.07
SNX16P57768 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
SNX16P57768 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.76■■□□□ 1.07
SNX16P57768 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX16P57768 AL137784.2-201ENST00000607332 1000 ntBASIC21.76■■□□□ 1.07
SNX16P57768 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SNX16P57768 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.76■■□□□ 1.07
SNX16P57768 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SNX16P57768 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX16P57768 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.76■■□□□ 1.07
SNX16P57768 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX16P57768 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX16P57768 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX16P57768 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX16P57768 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX16P57768 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX16P57768 AC006128.1-201ENST00000624704 1661 ntBASIC21.75■■□□□ 1.07
SNX16P57768 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SNX16P57768 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SNX16P57768 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX16P57768 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SNX16P57768 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX16P57768 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.75■■□□□ 1.07
SNX16P57768 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.75■■□□□ 1.07
SNX16P57768 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX16P57768 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.75■■□□□ 1.07
SNX16P57768 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.75■■□□□ 1.07
SNX16P57768 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.75■■□□□ 1.07
SNX16P57768 AC231657.2-201ENST00000624556 255 ntBASIC21.75■■□□□ 1.07
SNX16P57768 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
SNX16P57768 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.75■■□□□ 1.07
SNX16P57768 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX16P57768 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNX16P57768 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SNX16P57768 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SNX16P57768 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX16P57768 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX16P57768 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX16P57768 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.74■■□□□ 1.07
SNX16P57768 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNX16P57768 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX16P57768 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
SNX16P57768 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
SNX16P57768 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SNX16P57768 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX16P57768 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SNX16P57768 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.73■■□□□ 1.07
SNX16P57768 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SNX16P57768 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX16P57768 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SNX16P57768 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX16P57768 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SNX16P57768 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX16P57768 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX16P57768 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX16P57768 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX16P57768 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX16P57768 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX16P57768 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.72■■□□□ 1.07
SNX16P57768 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX16P57768 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX16P57768 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX16P57768 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX16P57768 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX16P57768 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SNX16P57768 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX16P57768 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX16P57768 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX16P57768 DUX4L16-201ENST00000555130 1264 ntBASIC21.72■■□□□ 1.07
SNX16P57768 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.72■■□□□ 1.07
SNX16P57768 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX16P57768 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX16P57768 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.71■■□□□ 1.07
SNX16P57768 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.71■■□□□ 1.07
SNX16P57768 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SNX16P57768 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX16P57768 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms