Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXG1P55316 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXG1P55316 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXG1P55316 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
FOXG1P55316 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXG1P55316 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXG1P55316 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXG1P55316 AC098934.4-201ENST00000564127 592 ntBASIC18.12■□□□□ 0.49
FOXG1P55316 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXG1P55316 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXG1P55316 MKRN4P-201ENST00000444706 1521 ntBASIC18.12■□□□□ 0.49
FOXG1P55316 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
FOXG1P55316 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXG1P55316 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXG1P55316 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXG1P55316 PLK5-205ENST00000642079 1969 ntBASIC18.11■□□□□ 0.49
FOXG1P55316 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
FOXG1P55316 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXG1P55316 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
FOXG1P55316 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.11■□□□□ 0.49
FOXG1P55316 AL512625.2-201ENST00000417533 625 ntBASIC18.11■□□□□ 0.49
FOXG1P55316 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.11■□□□□ 0.49
FOXG1P55316 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXG1P55316 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.11■□□□□ 0.49
FOXG1P55316 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXG1P55316 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXG1P55316 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXG1P55316 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXG1P55316 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXG1P55316 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXG1P55316 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXG1P55316 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXG1P55316 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXG1P55316 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXG1P55316 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXG1P55316 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXG1P55316 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXG1P55316 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXG1P55316 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXG1P55316 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXG1P55316 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXG1P55316 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
FOXG1P55316 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXG1P55316 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXG1P55316 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXG1P55316 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXG1P55316 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
FOXG1P55316 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXG1P55316 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
FOXG1P55316 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXG1P55316 AC121338.2-201ENST00000622535 1744 ntBASIC18.09■□□□□ 0.49
FOXG1P55316 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
FOXG1P55316 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
FOXG1P55316 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXG1P55316 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXG1P55316 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXG1P55316 SLC29A4P1-201ENST00000398760 971 ntBASIC18.09■□□□□ 0.49
FOXG1P55316 MIPEPP3-201ENST00000412105 444 ntBASIC18.09■□□□□ 0.49
FOXG1P55316 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.09■□□□□ 0.49
FOXG1P55316 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXG1P55316 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXG1P55316 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXG1P55316 AC011484.1-201ENST00000377652 1995 ntBASIC18.09■□□□□ 0.49
FOXG1P55316 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXG1P55316 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXG1P55316 CLDN5-201ENST00000403084 2357 ntBASIC18.09■□□□□ 0.49
FOXG1P55316 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXG1P55316 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXG1P55316 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.08■□□□□ 0.49
FOXG1P55316 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
FOXG1P55316 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.08■□□□□ 0.49
FOXG1P55316 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.08■□□□□ 0.49
FOXG1P55316 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FOXG1P55316 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXG1P55316 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.08■□□□□ 0.48
FOXG1P55316 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXG1P55316 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXG1P55316 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.08■□□□□ 0.48
FOXG1P55316 BX276092.2-201ENST00000417668 665 ntBASIC18.08■□□□□ 0.48
FOXG1P55316 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.08■□□□□ 0.48
FOXG1P55316 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.08■□□□□ 0.48
FOXG1P55316 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.08■□□□□ 0.48
FOXG1P55316 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.08■□□□□ 0.48
FOXG1P55316 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.08■□□□□ 0.48
FOXG1P55316 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FOXG1P55316 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.08■□□□□ 0.48
FOXG1P55316 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXG1P55316 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FOXG1P55316 KRT17P1-201ENST00000399211 1546 ntBASIC18.08■□□□□ 0.48
FOXG1P55316 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FOXG1P55316 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXG1P55316 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXG1P55316 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXG1P55316 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
FOXG1P55316 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXG1P55316 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXG1P55316 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXG1P55316 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXG1P55316 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXG1P55316 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms