Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CDH12P55289 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CDH12P55289 AC020907.5-201ENST00000624372 1936 ntBASIC19.18■□□□□ 0.66
CDH12P55289 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH12P55289 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH12P55289 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDH12P55289 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH12P55289 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH12P55289 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH12P55289 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.18■□□□□ 0.66
CDH12P55289 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH12P55289 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH12P55289 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH12P55289 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CDH12P55289 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH12P55289 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CDH12P55289 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH12P55289 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDH12P55289 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH12P55289 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH12P55289 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
CDH12P55289 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH12P55289 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH12P55289 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH12P55289 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH12P55289 AC012414.1-201ENST00000556676 535 ntBASIC19.17■□□□□ 0.66
CDH12P55289 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH12P55289 AFG3L1P-217ENST00000557444 2447 ntBASIC19.17■□□□□ 0.66
CDH12P55289 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH12P55289 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH12P55289 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH12P55289 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH12P55289 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH12P55289 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH12P55289 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH12P55289 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH12P55289 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH12P55289 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CDH12P55289 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CDH12P55289 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH12P55289 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH12P55289 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH12P55289 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH12P55289 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH12P55289 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CDH12P55289 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH12P55289 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH12P55289 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH12P55289 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CDH12P55289 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH12P55289 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH12P55289 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH12P55289 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CDH12P55289 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH12P55289 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH12P55289 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH12P55289 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH12P55289 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH12P55289 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH12P55289 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH12P55289 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH12P55289 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH12P55289 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH12P55289 AC142381.2-201ENST00000566120 298 ntBASIC19.15■□□□□ 0.66
CDH12P55289 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.15■□□□□ 0.66
CDH12P55289 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDH12P55289 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH12P55289 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH12P55289 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH12P55289 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH12P55289 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH12P55289 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH12P55289 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH12P55289 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH12P55289 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.14■□□□□ 0.66
CDH12P55289 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH12P55289 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDH12P55289 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH12P55289 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CDH12P55289 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH12P55289 FP700111.2-201ENST00000619190 1892 ntBASIC19.14■□□□□ 0.65
CDH12P55289 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDH12P55289 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH12P55289 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.14■□□□□ 0.65
CDH12P55289 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.14■□□□□ 0.65
CDH12P55289 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH12P55289 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH12P55289 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH12P55289 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH12P55289 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH12P55289 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CDH12P55289 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDH12P55289 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH12P55289 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH12P55289 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH12P55289 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
CDH12P55289 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
CDH12P55289 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH12P55289 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.13■□□□□ 0.65
CDH12P55289 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms